RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 WHRNQ9P202 907 aa15.38■□□□□ 0.05
CSNK1E-215ENST00000612795 GDF2Q9UK05 429 aaPredicted RBP15.38■□□□□ 0.05
CSNK1E-215ENST00000612795 ABCG2Q9UNQ0 655 aa15.38■□□□□ 0.05
CSNK1E-215ENST00000612795 SNX8Q9Y5X2 465 aa15.38■□□□□ 0.05
CSNK1E-215ENST00000612795 FREM1Q5H8C1 2179 aa15.38■□□□□ 0.05
CSNK1E-215ENST00000612795 CADP27708 2225 aa15.37■□□□□ 0.05
CSNK1E-215ENST00000612795 CCDC189A1A4V9 331 aa15.37■□□□□ 0.05
CSNK1E-215ENST00000612795 SSX4O60224 188 aa15.37■□□□□ 0.05
CSNK1E-215ENST00000612795 GMFGO60234 142 aa15.37■□□□□ 0.05
CSNK1E-215ENST00000612795 SYNGR4O95473 234 aa15.37■□□□□ 0.05
CSNK1E-215ENST00000612795 FESP07332 822 aa15.37■□□□□ 0.05
CSNK1E-215ENST00000612795 IL11P20809 199 aa15.37■□□□□ 0.05
CSNK1E-215ENST00000612795 CLK3P49761 638 aaKnown RBP15.37■□□□□ 0.05
CSNK1E-215ENST00000612795 ZNF672Q499Z4 452 aaPredicted RBP15.37■□□□□ 0.05
CSNK1E-215ENST00000612795 C3orf62Q6ZUJ4 267 aa15.37■□□□□ 0.05
CSNK1E-215ENST00000612795 KBTBD8Q8NFY9 601 aa15.37■□□□□ 0.05
CSNK1E-215ENST00000612795 MTBPQ96DY7 904 aa15.37■□□□□ 0.05
CSNK1E-215ENST00000612795 GLRX2Q9NS18 164 aa15.37■□□□□ 0.05
CSNK1E-215ENST00000612795 PAQR5Q9NXK6 330 aaPredicted RBP15.37■□□□□ 0.05
CSNK1E-215ENST00000612795 LPAR3Q9UBY5 353 aa15.37■□□□□ 0.05
CSNK1E-215ENST00000612795 SNX24Q9Y343 169 aa15.37■□□□□ 0.05
CSNK1E-215ENST00000612795 SHISA8B8ZZ34 492 aa15.36■□□□□ 0.05
CSNK1E-215ENST00000612795 DLX3O60479 287 aa15.36■□□□□ 0.05
CSNK1E-215ENST00000612795 TUBBP07437 444 aa15.36■□□□□ 0.05
CSNK1E-215ENST00000612795 TCP1P17987 556 aaKnown RBP15.36■□□□□ 0.05
CSNK1E-215ENST00000612795 IL32P24001 234 aa15.36■□□□□ 0.05
CSNK1E-215ENST00000612795 CASP9P55211 416 aa15.36■□□□□ 0.05
CSNK1E-215ENST00000612795 GALNT1Q10472 559 aaPredicted RBP15.36■□□□□ 0.05
CSNK1E-215ENST00000612795 ACAP2Q15057 778 aa15.36■□□□□ 0.05
CSNK1E-215ENST00000612795 NRF1Q16656 503 aa15.36■□□□□ 0.05
CSNK1E-215ENST00000612795 TMEM249Q2WGJ8 235 aa15.36■□□□□ 0.05
CSNK1E-215ENST00000612795 GLYR1Q49A26 553 aaPredicted RBP15.36■□□□□ 0.05
CSNK1E-215ENST00000612795 METTL2BQ6P1Q9 378 aaKnown RBP15.36■□□□□ 0.05
CSNK1E-215ENST00000612795 CCDC91Q7Z6B0 441 aa15.36■□□□□ 0.05
CSNK1E-215ENST00000612795 ZNF619Q8N2I2 560 aa15.36■□□□□ 0.05
CSNK1E-215ENST00000612795 PTGR2Q8N8N7 351 aaPredicted RBP15.36■□□□□ 0.05
CSNK1E-215ENST00000612795 OR10D3Q8NH80 312 aa15.36■□□□□ 0.05
CSNK1E-215ENST00000612795 DUSP19Q8WTR2 217 aa15.36■□□□□ 0.05
CSNK1E-215ENST00000612795 EXOSC8Q96B26 276 aaKnown RBP15.36■□□□□ 0.05
CSNK1E-215ENST00000612795 SHARPINQ9H0F6 387 aa15.36■□□□□ 0.05
CSNK1E-215ENST00000612795 GIMAP4Q9NUV9 329 aa15.36■□□□□ 0.05
CSNK1E-215ENST00000612795 FAIMQ9NVQ4 179 aa15.36■□□□□ 0.05
CSNK1E-215ENST00000612795 TAS2R9Q9NYW1 312 aa15.36■□□□□ 0.05
CSNK1E-215ENST00000612795 FLRT3Q9NZU0 649 aa15.36■□□□□ 0.05
CSNK1E-215ENST00000612795 XPR1Q9UBH6 696 aa15.36■□□□□ 0.05
CSNK1E-215ENST00000612795 IGHV4-30-2A0A087WSY4 118 aa15.35■□□□□ 0.05
CSNK1E-215ENST00000612795 EIF3HO15372 352 aaKnown RBP eCLIP15.35■□□□□ 0.05
CSNK1E-215ENST00000612795 FADS1O60427 444 aa15.35■□□□□ 0.05
CSNK1E-215ENST00000612795 NUDT6P53370 316 aa15.35■□□□□ 0.05
CSNK1E-215ENST00000612795 TRA2BP62995 288 aaKnown RBP15.35■□□□□ 0.05
CSNK1E-215ENST00000612795 TRAF3Q13114 568 aa15.35■□□□□ 0.05
CSNK1E-215ENST00000612795 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.35■□□□□ 0.05
CSNK1E-215ENST00000612795 PGGHGQ32M88 737 aa15.35■□□□□ 0.05
CSNK1E-215ENST00000612795 FIGNL1Q6PIW4 674 aa15.35■□□□□ 0.05
CSNK1E-215ENST00000612795 CYS1Q717R9 158 aa15.35■□□□□ 0.05
CSNK1E-215ENST00000612795 SAMD14Q8IZD0 417 aaPredicted RBP15.35■□□□□ 0.05
CSNK1E-215ENST00000612795 C1orf52Q8N6N3 182 aaKnown RBP15.35■□□□□ 0.05
CSNK1E-215ENST00000612795 SELENOMQ8WWX9 145 aa15.35■□□□□ 0.05
CSNK1E-215ENST00000612795 C11orf24Q96F05 449 aaPredicted RBP15.35■□□□□ 0.05
CSNK1E-215ENST00000612795 TRAF4Q9BUZ4 470 aaPredicted RBP15.35■□□□□ 0.05
CSNK1E-215ENST00000612795 FARSBQ9NSD9 589 aaKnown RBP15.35■□□□□ 0.05
CSNK1E-215ENST00000612795 NMRK1Q9NWW6 199 aa15.35■□□□□ 0.05
CSNK1E-215ENST00000612795 TMEM160Q9NX00 188 aa15.35■□□□□ 0.05
CSNK1E-215ENST00000612795 FAM120CQ9NX05 1096 aaKnown RBP15.35■□□□□ 0.05
CSNK1E-215ENST00000612795 VDAC3Q9Y277 283 aa15.35■□□□□ 0.05
CSNK1E-215ENST00000612795 ALPK2Q86TB3 2170 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 FAM234BA2RU67 622 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 CXCL13O43927 109 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 COQ9O75208 318 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 C2P06681 752 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 THBS1P07996 1170 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 GSTA2P09210 222 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 AGTR1P30556 359 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 RFX3P48380 749 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 PSG6Q00889 435 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 BSPH1Q075Z2 132 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 CALCOCO2Q13137 446 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 TSC22D1Q15714 1073 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 TAB1Q15750 504 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 DECR1Q16698 335 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 GGTA1PQ4G0N0 100 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 CLEC2AQ6UVW9 174 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 MARCH3Q86UD3 253 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 WDR75Q8IWA0 830 aaKnown RBP15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 FAM9CQ8IZT9 166 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 CEP112Q8N8E3 955 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 OR4F6Q8NGB9 312 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 PHF21BQ96EK2 531 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 TNFRSF13CQ96RJ3 184 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 HDHD5Q9BXW7 423 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 TBL1XR1Q9BZK7 514 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 RTN4RQ9BZR6 473 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 BRF2Q9HAW0 419 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 FBXO34Q9NWN3 711 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 MALRD1Q5VYJ5 2156 aa15.34■□□□□ 0.05
CSNK1E-215ENST00000612795 UBFD1O14562 309 aaKnown RBP15.33■□□□□ 0.04
CSNK1E-215ENST00000612795 PLOD3O60568 738 aa15.33■□□□□ 0.04
CSNK1E-215ENST00000612795 KLHL2O95198 593 aa15.33■□□□□ 0.04
CSNK1E-215ENST00000612795 PDYNP01213 254 aa15.33■□□□□ 0.04
CSNK1E-215ENST00000612795 IL3P08700 152 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms