RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 ERICH1Q86X53 443 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 HPS6Q86YV9 775 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 CERS5Q8N5B7 392 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 BCORP1Q8N888 145 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 CCDC148Q8NFR7 591 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 SLC5A11Q8WWX8 675 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 MCHR2Q969V1 340 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 SLC25A36Q96CQ1 311 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 DNAJA3Q96EY1 480 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 C9orf85Q96MD7 179 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 RBM14Q96PK6 669 aaKnown RBP3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 CCDC94Q9BW85 323 aaPredicted RBP3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 SLC7A5P2Q9GIP4 190 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 KAT8Q9H7Z6 458 aaKnown RBP3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 VAT1LQ9HCJ6 419 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 TM9SF3Q9HD45 589 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 YAE1D1Q9NRH1 226 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 IMPAD1Q9NX62 359 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 DUS2Q9NX74 493 aaKnown RBP3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 PRODH2Q9UF12 536 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 MGAT4BQ9UQ53 548 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 TRBV7-9A0A0J9YWB2 115 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 CLRN2A0PK11 232 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 FBLL1A6NHQ2 334 aaKnown RBP3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 CCT8L1PA6NM43 557 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 ANKRD30BLA7E2S9 258 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 EFCAB7A8K855 629 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 H0YL77 283 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 CTAGE5O15320 804 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 RNF113AO15541 343 aaKnown RBP3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 TOM1L1O75674 476 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 ANXA4P09525 319 aaPredicted RBP3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 ADSSP30520 456 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 HTR5AP47898 357 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 POU3F4P49335 361 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 STK19P49842 368 aaPredicted RBP3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 SULT1E1P49888 294 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 HNMTP50135 292 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 METAP1P53582 386 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 PPIAP62937 165 aaKnown RBP3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 BEX3Q00994 111 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 RUNX3Q13761 415 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 DPYSQ14117 519 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 RAB35Q15286 201 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 MAJINQ3KP22 176 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 TIMM50Q3ZCQ8 353 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 SLC25A30Q5SVS4 291 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 CCDC183Q5T5S1 534 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 HACD2Q6Y1H2 254 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 MISPQ8IVT2 679 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 NAXDQ8IW45 347 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 CCDC36Q8IYA8 594 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 OR52B4Q8NGK2 314 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 TYMSOSQ8TAI1 123 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 FNDC8Q8TC99 324 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 VN1R17PQ8TDU5 208 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 GIPC3Q8TF64 312 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 RNF139Q8WU17 664 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 ART4Q93070 314 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 PINX1Q96BK5 328 aaKnown RBP3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 C11orf24Q96F05 449 aaPredicted RBP3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 TRPV5Q9NQA5 729 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 QPCTLQ9NXS2 382 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 CGNQ9P2M7 1197 aaKnown RBP3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 NTNG1Q9Y2I2 539 aa3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 CAB39Q9Y376 341 aaPredicted RBP3.29□□□□□ -1.88
SMCHD1-213ENST00000609587 MROH5Q6ZUA9 1318 aa3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 TTC21BQ7Z4L5 1316 aa3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 RNF222A6NCQ9 220 aa3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 LCMT2O60294 686 aaKnown RBP3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 TSC22D2O75157 780 aa3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 SCGB2A1O75556 95 aa3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 AKR7A3O95154 331 aa3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 CA3P07451 260 aa3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 GSTT2P0CG29 244 aa3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 GSTT2BP0CG30 244 aa3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 HSPA5P11021 654 aaKnown RBP3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 SOX6P35712 828 aa3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 ATP5OP48047 213 aa3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 ARHGDIBP52566 201 aa3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 CTAG1AP78358 180 aa3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 EXOSC2Q13868 293 aaKnown RBP3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 RFTN1Q14699 578 aaPredicted RBP3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 ZNF239Q16600 458 aaKnown RBP3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 Q1RN00 199 aa3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 ADPRMQ3LIE5 342 aa3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 SPINK14Q6IE38 97 aa3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 Q7L0L9 218 aa3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 NFAM1Q8NET5 270 aaPredicted RBP3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 OR6C4Q8NGE1 309 aa3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 TADA1Q96BN2 335 aa3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 RANBP9Q96S59 729 aa3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 TXN2Q99757 166 aa3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 CRLF2Q9HC73 371 aa3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 DDX18Q9NVP1 670 aaKnown RBP3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 FAM120CQ9NX05 1096 aaKnown RBP3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 ATXN10Q9UBB4 475 aa3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 RSPH14Q9UHP6 348 aa3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 PTBP2Q9UKA9 531 aaKnown RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms