RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 CHFRQ96EP1 664 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 POM121Q96HA1 1249 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 SOX7Q9BT81 388 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 PBX4Q9BYU1 374 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 NPDC1Q9NQX5 325 aaPredicted RBP11.82□□□□□ -0.52
CTCFL-218ENST00000608440 MAGEB17A8MXT2 336 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 H3BRB1 525 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 C22orf31O95567 290 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 UCHL1P09936 223 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 ZNF35P13682 527 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 ABCD3P28288 659 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 MBTD1Q05BQ5 628 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 PEA15Q15121 130 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 GPRC6AQ5T6X5 926 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 OAFQ86UD1 273 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 MISPQ8IVT2 679 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 OR11G2Q8NGC1 345 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 OR1S2Q8NGQ3 325 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 TCTEX1D2Q8WW35 142 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 S100PBPQ96BU1 408 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 NEU1Q99519 415 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 C11orf49Q9H6J7 331 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 MINDY3Q9H8M7 445 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 GJD2Q9UKL4 321 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 RASD1Q9Y272 281 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 TRDV1A0A1B0GX56 115 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 CLDN4O14493 209 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 PHYHO14832 338 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 SLC28A2O43868 658 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 MAFKO60675 156 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 NIPSNAP2O75323 286 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 ANXA7P20073 488 aaKnown RBP11.81□□□□□ -0.52
CTCFL-218ENST00000608440 IRS1P35568 1242 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 TM4SF4P48230 202 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 SRSF3P84103 164 aaKnown RBP11.81□□□□□ -0.52
CTCFL-218ENST00000608440 TPBGQ13641 420 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 KRT33BQ14525 404 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 SDHAF4Q5VUM1 108 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 TMEM71Q6P5X7 295 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 KLHDC8BQ8IXV7 354 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 IZUMO1Q8IYV9 350 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 EDEM1Q92611 657 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 MARS2Q96GW9 593 aaKnown RBP11.81□□□□□ -0.52
CTCFL-218ENST00000608440 BBS4Q96RK4 519 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 MFFQ9GZY8 342 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.81□□□□□ -0.52
CTCFL-218ENST00000608440 CXCL16Q9H2A7 254 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 RHBGQ9H310 441 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 XKR8Q9H6D3 395 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 NT5MQ9NPB1 228 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 ACER3Q9NUN7 267 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 ASF1BQ9NVP2 202 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 PCDHB10Q9UN67 800 aa11.81□□□□□ -0.52
CTCFL-218ENST00000608440 IGKV6-21A0A0C4DH24 114 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 COLCA2A8K830 154 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 ANHXE9PGG2 379 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 KLK8O60259 260 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 DPM1O60762 260 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 ADAMTS4O75173 837 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 SRPRAP08240 638 aaKnown RBP11.8□□□□□ -0.52
CTCFL-218ENST00000608440 HMBSP08397 361 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 ZNF14P17017 642 aaPredicted RBP11.8□□□□□ -0.52
CTCFL-218ENST00000608440 NOS3P29474 1203 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 RBMS1P29558 406 aaKnown RBP11.8□□□□□ -0.52
CTCFL-218ENST00000608440 OR10A3P58181 314 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 UBE2MP61081 183 aaKnown RBP11.8□□□□□ -0.52
CTCFL-218ENST00000608440 SNRPGP62308 76 aaKnown RBP11.8□□□□□ -0.52
CTCFL-218ENST00000608440 SELENOWP63302 87 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 MAT1AQ00266 395 aaKnown RBP11.8□□□□□ -0.52
CTCFL-218ENST00000608440 MINDY4Q4G0A6 757 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 NCEH1Q6PIU2 408 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 OR52B4Q8NGK2 314 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 OR5M1Q8NGP8 315 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 ACOT11Q8WXI4 607 aaPredicted RBP11.8□□□□□ -0.52
CTCFL-218ENST00000608440 NT5C3BQ969T7 300 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 CPNE4Q96A23 557 aaPredicted RBP11.8□□□□□ -0.52
CTCFL-218ENST00000608440 MISP3Q96FF7 219 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 CPNE2Q96FN4 548 aaPredicted RBP11.8□□□□□ -0.52
CTCFL-218ENST00000608440 SCLYQ96I15 445 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 SLC39A8Q9C0K1 460 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 WDCPQ9H6R7 721 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 ATP13A1Q9HD20 1204 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 RASL12Q9NYN1 266 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 ZNF629Q9UEG4 869 aaPredicted RBP11.8□□□□□ -0.52
CTCFL-218ENST00000608440 FBXW11Q9UKB1 542 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 FZD4Q9ULV1 537 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 ST3GAL5Q9UNP4 418 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 ZSWIM8A7E2V4 1837 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 HTTP42858 3142 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 OR2M5A3KFT3 312 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 OR6C76A6NM76 312 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 NEDD8-MDP1E9PL57 170 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 GABRDO14764 452 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 MATN3O15232 486 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 PRKYO43930 277 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 RAD1O60671 282 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 OTCP00480 354 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 THP07101 528 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 IQCF3P0C7M6 154 aa11.8□□□□□ -0.52
CTCFL-218ENST00000608440 OR8U8P0C7N1 319 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms