RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 ANXA3P12429 323 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 ZNF26P17031 533 aaPredicted RBP4.24□□□□□ -1.73
LINC00397-202ENST00000606785 UQCRC2P22695 453 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 TAGLN2P37802 199 aaKnown RBP4.24□□□□□ -1.73
LINC00397-202ENST00000606785 PSMD7P51665 324 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 CCNHP51946 323 aaPredicted RBP4.24□□□□□ -1.73
LINC00397-202ENST00000606785 SLC7A2P52569 658 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 AIF1P55008 147 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 ARPC4P59998 168 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 EIF2B1Q14232 305 aaKnown RBP4.24□□□□□ -1.73
LINC00397-202ENST00000606785 TMEM187Q14656 261 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 MUC21Q5SSG8 566 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 ATF7IP2Q5U623 682 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 BTNL3Q6UXE8 466 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 TSEN54Q7Z6J9 526 aaKnown RBP4.24□□□□□ -1.73
LINC00397-202ENST00000606785 ANKRD37Q7Z713 158 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 ZFAND4Q86XD8 727 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 CCDC71Q8IV32 467 aaPredicted RBP4.24□□□□□ -1.73
LINC00397-202ENST00000606785 METTL4Q8N3J2 472 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 OR1B1Q8NGR6 318 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 ANKRD7Q92527 254 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 NABP1Q96AH0 204 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 NSMCE3Q96MG7 304 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 LGMNQ99538 433 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 RHOXF2Q9BQY4 288 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 SLC30A2Q9BRI3 323 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 GCOM2Q9BZD3 368 aaPredicted RBP4.24□□□□□ -1.73
LINC00397-202ENST00000606785 STRADBQ9C0K7 418 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 SLC25A51Q9H1U9 297 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 PARLQ9H300 379 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 LIME1Q9H400 295 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 RHOJQ9H4E5 214 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 ELOVL3Q9HB03 270 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 IL1RL2Q9HB29 575 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 APMAPQ9HDC9 416 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 EXOSC1Q9Y3B2 195 aaKnown RBP4.24□□□□□ -1.73
LINC00397-202ENST00000606785 NAALAD2Q9Y3Q0 740 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 FER1L5A0AVI2 2057 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 ESYT2A0FGR8 921 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 ZSCAN5BA6NJL1 495 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 CASKO14936 926 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 ZNF432O94892 652 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 FCGR3AP08637 254 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 HOXB7P09629 217 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 ZNF44P15621 663 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 STK19P49842 368 aaPredicted RBP4.23□□□□□ -1.73
LINC00397-202ENST00000606785 ETV1P50549 477 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 BLVRAP53004 296 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 TMEM50BP56557 158 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 ZNF85Q03923 595 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 MAPK6Q16659 721 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 MOGAT2Q3SYC2 334 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 SMUG1Q53HV7 270 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 CYBRD1Q53TN4 286 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 METTL11BQ5VVY1 283 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 PRR5LQ6MZQ0 368 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 ARHGAP11AQ6P4F7 1023 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 ADAMTSL5Q6ZMM2 481 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 GDPGP1Q6ZNW5 385 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 STOX1Q6ZVD7 989 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 SYT14Q8NB59 555 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 BHLHE23Q8NDY6 225 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 OR2T6Q8NHC8 308 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 RNF139Q8WU17 664 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 CDKL2Q92772 493 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 MYLPFQ96A32 169 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 FAM173AQ9BQD7 235 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 FEM1AQ9BSK4 669 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 CABLES2Q9BTV7 478 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 CRNKL1Q9BZJ0 848 aaKnown RBP4.23□□□□□ -1.73
LINC00397-202ENST00000606785 COMMD4Q9H0A8 199 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 MOB1AQ9H8S9 216 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 SP140LQ9H930 580 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 TM9SF3Q9HD45 589 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 NMRK1Q9NWW6 199 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 CACNG5Q9UF02 275 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 WDR45Q9Y484 360 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 SLCO1B1Q9Y6L6 691 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 SPACA6W5XKT8 324 aa4.23□□□□□ -1.73
LINC00397-202ENST00000606785 IGHV4-30-2A0A087WSY4 118 aa4.22□□□□□ -1.73
LINC00397-202ENST00000606785 MFSD2BA6NFX1 497 aa4.22□□□□□ -1.73
LINC00397-202ENST00000606785 K7EQG2 157 aa4.22□□□□□ -1.73
LINC00397-202ENST00000606785 NR5A2O00482 541 aa4.22□□□□□ -1.73
LINC00397-202ENST00000606785 ARPC3O15145 178 aa4.22□□□□□ -1.73
LINC00397-202ENST00000606785 CETN3O15182 167 aa4.22□□□□□ -1.73
LINC00397-202ENST00000606785 TM9SF1O15321 606 aa4.22□□□□□ -1.73
LINC00397-202ENST00000606785 STX11O75558 287 aa4.22□□□□□ -1.73
LINC00397-202ENST00000606785 IGHG1P01857 330 aa4.22□□□□□ -1.73
LINC00397-202ENST00000606785 TPM1P09493 284 aa4.22□□□□□ -1.73
LINC00397-202ENST00000606785 ZSCAN5DPP0CG00 497 aa4.22□□□□□ -1.73
LINC00397-202ENST00000606785 H2AFXP16104 143 aaPredicted RBP4.22□□□□□ -1.73
LINC00397-202ENST00000606785 CHMLP26374 656 aa4.22□□□□□ -1.73
LINC00397-202ENST00000606785 PLA2G16P53816 162 aa4.22□□□□□ -1.73
LINC00397-202ENST00000606785 SRPXP78539 464 aa4.22□□□□□ -1.73
LINC00397-202ENST00000606785 BASP1P80723 227 aaKnown RBP4.22□□□□□ -1.73
LINC00397-202ENST00000606785 FKBP3Q00688 224 aaKnown RBP4.22□□□□□ -1.73
LINC00397-202ENST00000606785 PPIDQ08752 370 aaKnown RBP4.22□□□□□ -1.73
LINC00397-202ENST00000606785 ZNF146Q15072 292 aa4.22□□□□□ -1.73
LINC00397-202ENST00000606785 CHI3L2Q15782 390 aa4.22□□□□□ -1.73
LINC00397-202ENST00000606785 UBE2V2Q15819 145 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms