RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 GSTA1P08263 222 aa11.86□□□□□ -0.51
RPS28-204ENST00000602140 ADSLP30566 484 aaPredicted RBP11.86□□□□□ -0.51
RPS28-204ENST00000602140 NTSP30990 170 aa11.86□□□□□ -0.51
RPS28-204ENST00000602140 PCYT1AP49585 367 aa11.86□□□□□ -0.51
RPS28-204ENST00000602140 CLK3P49761 638 aaKnown RBP11.86□□□□□ -0.51
RPS28-204ENST00000602140 CLDN20P56880 219 aa11.86□□□□□ -0.51
RPS28-204ENST00000602140 LTBQ06643 244 aa11.86□□□□□ -0.51
RPS28-204ENST00000602140 GANABQ14697 944 aaKnown RBP11.86□□□□□ -0.51
RPS28-204ENST00000602140 ZNHIT3Q15649 155 aaPredicted RBP11.86□□□□□ -0.51
RPS28-204ENST00000602140 SHEQ5VZ18 495 aa11.86□□□□□ -0.51
RPS28-204ENST00000602140 MARCH3Q86UD3 253 aa11.86□□□□□ -0.51
RPS28-204ENST00000602140 CXorf67Q86X51 503 aaPredicted RBP11.86□□□□□ -0.51
RPS28-204ENST00000602140 OR2L13Q8N349 312 aa11.86□□□□□ -0.51
RPS28-204ENST00000602140 FNDC9Q8TBE3 224 aa11.86□□□□□ -0.51
RPS28-204ENST00000602140 ELP4Q96EB1 424 aa11.86□□□□□ -0.51
RPS28-204ENST00000602140 CCDC126Q96EE4 140 aa11.86□□□□□ -0.51
RPS28-204ENST00000602140 C1GALT1C1Q96EU7 318 aa11.86□□□□□ -0.51
RPS28-204ENST00000602140 ZNF845Q96IR2 970 aaPredicted RBP11.86□□□□□ -0.51
RPS28-204ENST00000602140 AMDHD1Q96NU7 426 aa11.86□□□□□ -0.51
RPS28-204ENST00000602140 MED18Q9BUE0 208 aa11.86□□□□□ -0.51
RPS28-204ENST00000602140 FAM120CQ9NX05 1096 aaKnown RBP11.86□□□□□ -0.51
RPS28-204ENST00000602140 ZNF226Q9NYT6 803 aa11.86□□□□□ -0.51
RPS28-204ENST00000602140 PSMC3IPQ9P2W1 217 aaPredicted RBP11.86□□□□□ -0.51
RPS28-204ENST00000602140 TBK1Q9UHD2 729 aa11.86□□□□□ -0.51
RPS28-204ENST00000602140 DCDC2Q9UHG0 476 aa11.86□□□□□ -0.51
RPS28-204ENST00000602140 MRTO4Q9UKD2 239 aaKnown RBP11.86□□□□□ -0.51
RPS28-204ENST00000602140 DEFB108AA8MXU0 73 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 G3V2L1 256 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 LINC01387J3KSC0 135 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 EMC8O43402 210 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 GMFGO60234 142 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 CRCPO75575 148 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 PSMG1O95456 288 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 INHBBP09529 407 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 MYL2P10916 166 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 POU2F1P14859 743 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 GABRA3P34903 492 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 UGT2B10P36537 528 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 KCNJ5P48544 419 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 SLC29A2Q14542 456 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 PON3Q15166 354 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 NOXRED1Q6NXP6 359 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 ZYG11AQ6WRX3 759 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 ZNF550Q7Z398 422 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 TRIM46Q7Z4K8 759 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 FAM76AQ8TAV0 307 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 MZB1Q8WU39 189 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 PIK3IP1Q96FE7 263 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 PIGQQ9BRB3 760 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 SLC39A3Q9BRY0 314 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 LMF2Q9BU23 707 aaKnown RBP11.85□□□□□ -0.51
RPS28-204ENST00000602140 RNF122Q9H9V4 155 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 ELOVL5Q9NYP7 299 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 EMCNQ9ULC0 261 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 WBP11Q9Y2W2 641 aaKnown RBP11.85□□□□□ -0.51
RPS28-204ENST00000602140 ZNF175Q9Y473 711 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 NAV3Q8IVL0 2385 aa11.85□□□□□ -0.51
RPS28-204ENST00000602140 A0A1W2PPM1 405 aa11.84□□□□□ -0.51
RPS28-204ENST00000602140 GXYLT2A0PJZ3 443 aa11.84□□□□□ -0.51
RPS28-204ENST00000602140 C16orf97H3BN30 126 aa11.84□□□□□ -0.51
RPS28-204ENST00000602140 ARHGEF9O43307 516 aa11.84□□□□□ -0.51
RPS28-204ENST00000602140 SMPD2O60906 423 aa11.84□□□□□ -0.51
RPS28-204ENST00000602140 RSL1D1O76021 490 aaKnown RBP11.84□□□□□ -0.51
RPS28-204ENST00000602140 UTS2O95399 124 aa11.84□□□□□ -0.51
RPS28-204ENST00000602140 ANGPTL1O95841 491 aa11.84□□□□□ -0.51
RPS28-204ENST00000602140 CGAP01215 116 aa11.84□□□□□ -0.51
RPS28-204ENST00000602140 FAM153BP0C7A2 387 aa11.84□□□□□ -0.51
RPS28-204ENST00000602140 CRYGSP22914 178 aa11.84□□□□□ -0.51
RPS28-204ENST00000602140 CCKARP32238 428 aa11.84□□□□□ -0.51
RPS28-204ENST00000602140 PSMD4P55036 377 aaKnown RBP11.84□□□□□ -0.51
RPS28-204ENST00000602140 RPS3AP61247 264 aaKnown RBP11.84□□□□□ -0.51
RPS28-204ENST00000602140 C17orf67Q0P5P2 114 aa11.84□□□□□ -0.51
RPS28-204ENST00000602140 SGCBQ16585 318 aa11.84□□□□□ -0.51
RPS28-204ENST00000602140 FAM153CQ494X1 144 aa11.84□□□□□ -0.51
RPS28-204ENST00000602140 GLYR1Q49A26 553 aaPredicted RBP11.84□□□□□ -0.51
RPS28-204ENST00000602140 CLEC9AQ6UXN8 241 aa11.84□□□□□ -0.51
RPS28-204ENST00000602140 FRMD7Q6ZUT3 714 aa11.84□□□□□ -0.51
RPS28-204ENST00000602140 ZNF551Q7Z340 670 aaPredicted RBP11.84□□□□□ -0.51
RPS28-204ENST00000602140 P3H2Q8IVL5 708 aa11.84□□□□□ -0.51
RPS28-204ENST00000602140 IFT20Q8IY31 132 aa11.84□□□□□ -0.51
RPS28-204ENST00000602140 ZNF610Q8N9Z0 462 aa11.84□□□□□ -0.51
RPS28-204ENST00000602140 PIGTQ969N2 578 aa11.84□□□□□ -0.51
RPS28-204ENST00000602140 ZC3HAV1LQ96H79 300 aaKnown RBP11.84□□□□□ -0.51
RPS28-204ENST00000602140 EGLN2Q96KS0 407 aa11.84□□□□□ -0.51
RPS28-204ENST00000602140 TBL1XR1Q9BZK7 514 aa11.84□□□□□ -0.51
RPS28-204ENST00000602140 ZNF395Q9H8N7 513 aaPredicted RBP11.84□□□□□ -0.51
RPS28-204ENST00000602140 UBTD1Q9HAC8 227 aa11.84□□□□□ -0.51
RPS28-204ENST00000602140 C3orf14Q9HBI5 128 aa11.84□□□□□ -0.51
RPS28-204ENST00000602140 TNFRSF12AQ9NP84 129 aa11.84□□□□□ -0.51
RPS28-204ENST00000602140 EQTNQ9NQ60 294 aa11.84□□□□□ -0.51
RPS28-204ENST00000602140 RRAGDQ9NQL2 400 aaPredicted RBP11.84□□□□□ -0.51
RPS28-204ENST00000602140 AP4B1Q9Y6B7 739 aa11.84□□□□□ -0.51
RPS28-204ENST00000602140 IGLV3-32A0A0A0MS00 114 aa11.83□□□□□ -0.52
RPS28-204ENST00000602140 SHISA8B8ZZ34 492 aa11.83□□□□□ -0.52
RPS28-204ENST00000602140 H3BQF6 201 aa11.83□□□□□ -0.52
RPS28-204ENST00000602140 GLRA3O75311 464 aa11.83□□□□□ -0.52
RPS28-204ENST00000602140 SEC22BO75396 215 aa11.83□□□□□ -0.52
RPS28-204ENST00000602140 AQP8O94778 261 aa11.83□□□□□ -0.52
RPS28-204ENST00000602140 KCNH1O95259 989 aa11.83□□□□□ -0.52
RPS28-204ENST00000602140 IGKV1D-16P01601 117 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms