RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 ABATP80404 500 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 DBPQ10586 325 aaPredicted RBP18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 AGERQ15109 404 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 P2RY14Q15391 338 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 CEBPEQ15744 281 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 NDUFA5Q16718 116 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 TJAP1Q5JTD0 557 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 VWA5B2Q8N398 1253 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 MFSD9Q8NBP5 474 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 CDS1Q92903 461 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 OTULINQ96BN8 352 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 SLC41A3Q96GZ6 507 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 SNX18Q96RF0 628 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 BEX2Q9BXY8 128 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 KLHL28Q9NXS3 571 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 CALML5Q9NZT1 146 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 S100A1P23297 94 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 FCARP24071 287 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 MYL9P24844 172 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 MAT2AP31153 395 aaKnown RBP18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 IFNA8P32881 189 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 ERVK-21P61565 698 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 DECR1Q16698 335 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 PGGHGQ32M88 737 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 FRRS1Q6ZNA5 592 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 ZNF620Q6ZNG0 422 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 SPRYD4Q8WW59 207 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 NR4A3Q92570 626 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 ARMC5Q96C12 935 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 RANGRFQ9HD47 186 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 USP34Q70CQ2 3546 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 CENPVL1A0A0U1RR11 272 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 C2orf92A0A1B0GVN3 265 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 PRR19A6NJB7 356 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 CD8B2A6NJW9 211 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 SOCS6O14544 535 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 DVL2O14641 736 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 KLF4O43474 513 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 CD8BP10966 210 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 CMPK1P30085 196 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 ATP6V1E1P36543 226 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 STAT5AP42229 794 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 SGCGQ13326 291 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 RUNX3Q13761 415 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 DSG2Q14126 1118 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 ZNF425Q6IV72 752 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 NRROSQ86YC3 692 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 MARCH9Q86YJ5 346 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 TRIM48Q8IWZ4 208 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 SRFBP1Q8NEF9 429 aaKnown RBP18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 OR4E2Q8NGC2 313 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 NEIL3Q8TAT5 605 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 SLC7A6Q92536 515 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 DEPDC7Q96QD5 511 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 FYTTD1Q96QD9 318 aaKnown RBP18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 SECISBP2Q96T21 854 aaKnown RBP18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 ANKRD19PQ9H560 264 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 DPP7Q9UHL4 492 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 SLC7A7Q9UM01 511 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 SLC17A4Q9Y2C5 497 aa18.89■□□□□ 0.61
SHKBP1-225ENST00000600733 GABRPO00591 440 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 POU2F2P09086 479 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 ZNF888P0CJ79 500 aaPredicted RBP18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 STXBP1P61764 594 aaKnown RBP18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 PPP3R1P63098 170 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 RACK1P63244 317 aaKnown RBP18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 FAM214AQ32MH5 1076 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 PUS10Q3MIT2 529 aaKnown RBP18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 VASNQ6EMK4 673 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 MBOAT2Q6ZWT7 520 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 VN1R4Q7Z5H5 301 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 GLCCI1Q86VQ1 547 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 GALNT12Q8IXK2 581 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 NLGN4YQ8NFZ3 816 aaPredicted RBP18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 UBASH3BQ8TF42 649 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 KIAA1143Q96AT1 154 aaPredicted RBP18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 SAMD8Q96LT4 415 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 ATF6BQ99941 703 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 SARGQ9BW04 601 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 RNF121Q9H920 327 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 HINT3Q9NQE9 182 aaKnown RBP18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 CBLCQ9ULV8 474 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 ZNF232Q9UNY5 417 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 ZNF443Q9Y2A4 671 aaPredicted RBP18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 FAM172BPA6NC97 362 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 BTN3A3O00478 584 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 AKAP8O43823 692 aaKnown RBP18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 SLC2A2P11168 524 aaPredicted RBP18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 C5AR1P21730 350 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 IGFALSP35858 605 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 MFSD12Q6NUT3 480 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 KLBQ86Z14 1044 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 CPOQ8IVL8 374 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 OR4N5Q8IXE1 308 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 Q8N402 240 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 KLHL36Q8N4N3 616 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 SIRT6Q8N6T7 355 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 ENKURQ8TC29 256 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 GANCQ8TET4 914 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 DOK4Q8TEW6 326 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms