RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 FBXW4P57775 412 aa17.31■□□□□ 0.36
CCDC9-205ENST00000600117 POU6F2P78424 691 aaPredicted RBP17.31■□□□□ 0.36
CCDC9-205ENST00000600117 FUT5Q11128 374 aa17.31■□□□□ 0.36
CCDC9-205ENST00000600117 RGNQ15493 299 aa17.31■□□□□ 0.36
CCDC9-205ENST00000600117 DECR1Q16698 335 aa17.31■□□□□ 0.36
CCDC9-205ENST00000600117 SPINK14Q6IE38 97 aa17.31■□□□□ 0.36
CCDC9-205ENST00000600117 HEPHL1Q6MZM0 1159 aa17.31■□□□□ 0.36
CCDC9-205ENST00000600117 RTL4Q6ZR62 310 aa17.31■□□□□ 0.36
CCDC9-205ENST00000600117 Q6ZS92 163 aa17.31■□□□□ 0.36
CCDC9-205ENST00000600117 MDGA2Q7Z553 956 aa17.31■□□□□ 0.36
CCDC9-205ENST00000600117 CHDHQ8NE62 594 aaPredicted RBP17.31■□□□□ 0.36
CCDC9-205ENST00000600117 OR10G3Q8NGC4 313 aa17.31■□□□□ 0.36
CCDC9-205ENST00000600117 DIO2Q92813 273 aa17.31■□□□□ 0.36
CCDC9-205ENST00000600117 EFHD2Q96C19 240 aaPredicted RBP17.31■□□□□ 0.36
CCDC9-205ENST00000600117 EFCAB1Q9HAE3 211 aa17.31■□□□□ 0.36
CCDC9-205ENST00000600117 FBXO34Q9NWN3 711 aa17.31■□□□□ 0.36
CCDC9-205ENST00000600117 CHCHD2Q9Y6H1 151 aaPredicted RBP17.31■□□□□ 0.36
CCDC9-205ENST00000600117 TACC2O95359 2948 aa17.31■□□□□ 0.36
CCDC9-205ENST00000600117 WIPF3A6NGB9 483 aa17.3■□□□□ 0.36
CCDC9-205ENST00000600117 OR6C70A6NIJ9 312 aa17.3■□□□□ 0.36
CCDC9-205ENST00000600117 UGT2B11O75310 529 aa17.3■□□□□ 0.36
CCDC9-205ENST00000600117 SORBS2O94875 1100 aaKnown RBP17.3■□□□□ 0.36
CCDC9-205ENST00000600117 BMP2P12643 396 aa17.3■□□□□ 0.36
CCDC9-205ENST00000600117 POU3F2P20265 443 aaPredicted RBP17.3■□□□□ 0.36
CCDC9-205ENST00000600117 CPA2P48052 419 aa17.3■□□□□ 0.36
CCDC9-205ENST00000600117 PNLIPRP2P54317 469 aa17.3■□□□□ 0.36
CCDC9-205ENST00000600117 MTPNP58546 118 aa17.3■□□□□ 0.36
CCDC9-205ENST00000600117 FADDQ13158 208 aa17.3■□□□□ 0.36
CCDC9-205ENST00000600117 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.3■□□□□ 0.36
CCDC9-205ENST00000600117 EIF2S3LQ2VIR3 472 aaKnown RBP17.3■□□□□ 0.36
CCDC9-205ENST00000600117 DCST2Q5T1A1 773 aa17.3■□□□□ 0.36
CCDC9-205ENST00000600117 CCNJQ5T5M9 372 aa17.3■□□□□ 0.36
CCDC9-205ENST00000600117 NANOGP8Q6NSW7 305 aa17.3■□□□□ 0.36
CCDC9-205ENST00000600117 C8orf82Q6P1X6 216 aaPredicted RBP17.3■□□□□ 0.36
CCDC9-205ENST00000600117 FIGNL1Q6PIW4 674 aa17.3■□□□□ 0.36
CCDC9-205ENST00000600117 HACD2Q6Y1H2 254 aa17.3■□□□□ 0.36
CCDC9-205ENST00000600117 TRPM8Q7Z2W7 1104 aa17.3■□□□□ 0.36
CCDC9-205ENST00000600117 ZAR1Q86SH2 424 aa17.3■□□□□ 0.36
CCDC9-205ENST00000600117 GOLM1Q8NBJ4 401 aa17.3■□□□□ 0.36
CCDC9-205ENST00000600117 XAGE5Q8WWM1 108 aa17.3■□□□□ 0.36
CCDC9-205ENST00000600117 ROPN1LQ96C74 230 aa17.3■□□□□ 0.36
CCDC9-205ENST00000600117 SGCZQ96LD1 299 aa17.3■□□□□ 0.36
CCDC9-205ENST00000600117 COL21A1Q96P44 957 aa17.3■□□□□ 0.36
CCDC9-205ENST00000600117 ADOQ96SZ5 270 aa17.3■□□□□ 0.36
CCDC9-205ENST00000600117 GPATCH1Q9BRR8 931 aaKnown RBP17.3■□□□□ 0.36
CCDC9-205ENST00000600117 HES7Q9BYE0 225 aa17.3■□□□□ 0.36
CCDC9-205ENST00000600117 RAD21L1Q9H4I0 556 aa17.3■□□□□ 0.36
CCDC9-205ENST00000600117 NANOGQ9H9S0 305 aa17.3■□□□□ 0.36
CCDC9-205ENST00000600117 GID8Q9NWU2 228 aa17.3■□□□□ 0.36
CCDC9-205ENST00000600117 PCDHGB3Q9Y5G1 929 aa17.3■□□□□ 0.36
CCDC9-205ENST00000600117 TNFRSF21O75509 655 aa17.29■□□□□ 0.36
CCDC9-205ENST00000600117 CBX6O95503 412 aa17.29■□□□□ 0.36
CCDC9-205ENST00000600117 AGR2O95994 175 aa17.29■□□□□ 0.36
CCDC9-205ENST00000600117 CCL3P10147 92 aa17.29■□□□□ 0.36
CCDC9-205ENST00000600117 CYP4B1P13584 511 aa17.29■□□□□ 0.36
CCDC9-205ENST00000600117 KRT20P35900 424 aa17.29■□□□□ 0.36
CCDC9-205ENST00000600117 CRATP43155 626 aa17.29■□□□□ 0.36
CCDC9-205ENST00000600117 ANXA11P50995 505 aaKnown RBP17.29■□□□□ 0.36
CCDC9-205ENST00000600117 MAPK11Q15759 364 aa17.29■□□□□ 0.36
CCDC9-205ENST00000600117 ARHGAP11BQ3KRB8 267 aa17.29■□□□□ 0.36
CCDC9-205ENST00000600117 NUP54Q7Z3B4 507 aa17.29■□□□□ 0.36
CCDC9-205ENST00000600117 GALNT10Q86SR1 603 aa17.29■□□□□ 0.36
CCDC9-205ENST00000600117 FAM13CQ8NE31 585 aa17.29■□□□□ 0.36
CCDC9-205ENST00000600117 OR5M3Q8NGP4 307 aa17.29■□□□□ 0.36
CCDC9-205ENST00000600117 SPPL2AQ8TCT8 520 aa17.29■□□□□ 0.36
CCDC9-205ENST00000600117 PAQR8Q8TEZ7 354 aa17.29■□□□□ 0.36
CCDC9-205ENST00000600117 RNF138Q8WVD3 245 aa17.29■□□□□ 0.36
CCDC9-205ENST00000600117 SCMH1Q96GD3 660 aa17.29■□□□□ 0.36
CCDC9-205ENST00000600117 NODALQ96S42 347 aa17.29■□□□□ 0.36
CCDC9-205ENST00000600117 SDF2Q99470 211 aa17.29■□□□□ 0.36
CCDC9-205ENST00000600117 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.29■□□□□ 0.36
CCDC9-205ENST00000600117 EXD2Q9NVH0 621 aa17.29■□□□□ 0.36
CCDC9-205ENST00000600117 CNOT11Q9UKZ1 510 aaKnown RBP17.29■□□□□ 0.36
CCDC9-205ENST00000600117 NF1P21359 2839 aa17.28■□□□□ 0.36
CCDC9-205ENST00000600117 TRAV17A0A0B4J275 112 aa17.28■□□□□ 0.36
CCDC9-205ENST00000600117 EVPLLA8MZ36 301 aa17.28■□□□□ 0.36
CCDC9-205ENST00000600117 ABCB7O75027 752 aa17.28■□□□□ 0.36
CCDC9-205ENST00000600117 SLC25A12O75746 678 aa17.28■□□□□ 0.36
CCDC9-205ENST00000600117 AK1P00568 194 aa17.28■□□□□ 0.36
CCDC9-205ENST00000600117 NUDT7P0C024 238 aa17.28■□□□□ 0.36
CCDC9-205ENST00000600117 T-ENOLP0DO92 83 aa17.28■□□□□ 0.36
CCDC9-205ENST00000600117 SLC6A2P23975 617 aa17.28■□□□□ 0.36
CCDC9-205ENST00000600117 IL12BP29460 328 aa17.28■□□□□ 0.36
CCDC9-205ENST00000600117 NUDT2P50583 147 aa17.28■□□□□ 0.36
CCDC9-205ENST00000600117 DSTNP60981 165 aa17.28■□□□□ 0.36
CCDC9-205ENST00000600117 EFR3AQ14156 821 aa17.28■□□□□ 0.36
CCDC9-205ENST00000600117 NADK2Q4G0N4 442 aa17.28■□□□□ 0.36
CCDC9-205ENST00000600117 RABL3Q5HYI8 236 aa17.28■□□□□ 0.36
CCDC9-205ENST00000600117 SLC6A19Q695T7 634 aa17.28■□□□□ 0.36
CCDC9-205ENST00000600117 SLC25A25Q6KCM7 469 aa17.28■□□□□ 0.36
CCDC9-205ENST00000600117 OLIG3Q7RTU3 272 aa17.28■□□□□ 0.36
CCDC9-205ENST00000600117 PSD4Q8NDX1 1056 aa17.28■□□□□ 0.36
CCDC9-205ENST00000600117 OR8J3Q8NGG0 315 aa17.28■□□□□ 0.36
CCDC9-205ENST00000600117 FBXO27Q8NI29 283 aa17.28■□□□□ 0.36
CCDC9-205ENST00000600117 NTNG2Q96CW9 530 aa17.28■□□□□ 0.36
CCDC9-205ENST00000600117 NSL1Q96IY1 281 aa17.28■□□□□ 0.36
CCDC9-205ENST00000600117 SECISBP2Q96T21 854 aaKnown RBP17.28■□□□□ 0.36
CCDC9-205ENST00000600117 MFRPQ9BY79 579 aa17.28■□□□□ 0.36
CCDC9-205ENST00000600117 ZNF350Q9GZX5 532 aa17.28■□□□□ 0.36
CCDC9-205ENST00000600117 FLRT3Q9NZU0 649 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms