RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 PABPC4LP0CB38 370 aaKnown RBP13.53□□□□□ -0.24
VRK3-212ENST00000596814 NPIPA8P0DM63 369 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 RAP2AP10114 183 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 CD247P20963 164 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 ABCD3P28288 659 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 IL12BP29460 328 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 KRT20P35900 424 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 FKBP9P1Q75LS8 142 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 TAGAPQ8N103 731 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 OR52P1PQ8NH57 321 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 PMM1Q92871 262 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 EFHD2Q96C19 240 aaPredicted RBP13.53□□□□□ -0.24
VRK3-212ENST00000596814 OMA1Q96E52 524 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 MYOTQ9UBF9 498 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 BAG5Q9UL15 447 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 IFT52Q9Y366 437 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 PCDHGA10Q9Y5H3 936 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 AGAP5A6NIR3 686 aa13.52□□□□□ -0.25
VRK3-212ENST00000596814 TMEM200CA6NKL6 621 aa13.52□□□□□ -0.25
VRK3-212ENST00000596814 WWP2O00308 870 aa13.52□□□□□ -0.25
VRK3-212ENST00000596814 HOXB6P17509 224 aaKnown RBP13.52□□□□□ -0.25
VRK3-212ENST00000596814 RPS4Y1P22090 263 aaKnown RBP13.52□□□□□ -0.25
VRK3-212ENST00000596814 DCTP40126 519 aa13.52□□□□□ -0.25
VRK3-212ENST00000596814 ID4P47928 161 aa13.52□□□□□ -0.25
VRK3-212ENST00000596814 KCNJ5P48544 419 aa13.52□□□□□ -0.25
VRK3-212ENST00000596814 DUSP7Q16829 419 aa13.52□□□□□ -0.25
VRK3-212ENST00000596814 ZNF311Q5JNZ3 666 aa13.52□□□□□ -0.25
VRK3-212ENST00000596814 IRAK1BP1Q5VVH5 260 aa13.52□□□□□ -0.25
VRK3-212ENST00000596814 FBXW10Q5XX13 1052 aa13.52□□□□□ -0.25
VRK3-212ENST00000596814 AP1ARQ63HQ0 302 aa13.52□□□□□ -0.25
VRK3-212ENST00000596814 TCTN3Q6NUS6 607 aa13.52□□□□□ -0.25
VRK3-212ENST00000596814 C16orf47Q6ZP98 133 aaPredicted RBP13.52□□□□□ -0.25
VRK3-212ENST00000596814 VRK2Q86Y07 508 aa13.52□□□□□ -0.25
VRK3-212ENST00000596814 PAPD5Q8NDF8 572 aaKnown RBP13.52□□□□□ -0.25
VRK3-212ENST00000596814 DIO2Q92813 273 aa13.52□□□□□ -0.25
VRK3-212ENST00000596814 ZG16BQ96DA0 208 aa13.52□□□□□ -0.25
VRK3-212ENST00000596814 PINK1Q9BXM7 581 aa13.52□□□□□ -0.25
VRK3-212ENST00000596814 RNPEPL1Q9HAU8 725 aa13.52□□□□□ -0.25
VRK3-212ENST00000596814 ARMC1Q9NVT9 282 aa13.52□□□□□ -0.25
VRK3-212ENST00000596814 ZNF443Q9Y2A4 671 aaPredicted RBP13.52□□□□□ -0.25
VRK3-212ENST00000596814 CENPVL1A0A0U1RR11 272 aa13.51□□□□□ -0.25
VRK3-212ENST00000596814 MASP2O00187 686 aa13.51□□□□□ -0.25
VRK3-212ENST00000596814 TPST1O60507 370 aa13.51□□□□□ -0.25
VRK3-212ENST00000596814 REM1O75628 298 aa13.51□□□□□ -0.25
VRK3-212ENST00000596814 UGT2B17O75795 530 aa13.51□□□□□ -0.25
VRK3-212ENST00000596814 SEMG1P04279 462 aa13.51□□□□□ -0.25
VRK3-212ENST00000596814 SERPINA7P05543 415 aa13.51□□□□□ -0.25
VRK3-212ENST00000596814 DBIP07108 87 aaKnown RBP13.51□□□□□ -0.25
VRK3-212ENST00000596814 THBS1P07996 1170 aa13.51□□□□□ -0.25
VRK3-212ENST00000596814 ITGAMP11215 1152 aa13.51□□□□□ -0.25
VRK3-212ENST00000596814 IL7RP16871 459 aa13.51□□□□□ -0.25
VRK3-212ENST00000596814 PRKAR1BP31321 381 aa13.51□□□□□ -0.25
VRK3-212ENST00000596814 KCNJ10P78508 379 aa13.51□□□□□ -0.25
VRK3-212ENST00000596814 Q0VFX4 171 aa13.51□□□□□ -0.25
VRK3-212ENST00000596814 SRSF6Q13247 344 aaKnown RBP13.51□□□□□ -0.25
VRK3-212ENST00000596814 LARS2Q15031 903 aaKnown RBP13.51□□□□□ -0.25
VRK3-212ENST00000596814 LIN52Q52LA3 116 aa13.51□□□□□ -0.25
VRK3-212ENST00000596814 IFI44LQ53G44 452 aa13.51□□□□□ -0.25
VRK3-212ENST00000596814 GPR32P1Q8NGA4 272 aa13.51□□□□□ -0.25
VRK3-212ENST00000596814 SLC22A8Q8TCC7 542 aa13.51□□□□□ -0.25
VRK3-212ENST00000596814 GEMIN6Q8WXD5 167 aaKnown RBP13.51□□□□□ -0.25
VRK3-212ENST00000596814 PROX1Q92786 737 aa13.51□□□□□ -0.25
VRK3-212ENST00000596814 FGF11Q92914 225 aa13.51□□□□□ -0.25
VRK3-212ENST00000596814 YY1AP1Q9H869 796 aa13.51□□□□□ -0.25
VRK3-212ENST00000596814 HS6ST1O60243 411 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 TSPAN2O60636 221 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 NADKO95544 446 aaPredicted RBP13.5□□□□□ -0.25
VRK3-212ENST00000596814 FESP07332 822 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 LCN1P31025 176 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 ATP12AP54707 1039 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 MAPK14Q16539 360 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 DHRS4L2Q6PKH6 230 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 KBTBD2Q8IY47 623 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 ZNF614Q8N883 585 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 KCNE4Q8WWG9 221 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 NAF1Q96HR8 494 aaKnown RBP13.5□□□□□ -0.25
VRK3-212ENST00000596814 ZNF354BQ96LW1 612 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 FER1L6-AS2Q96M78 137 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 ADOQ96SZ5 270 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 CHID1Q9BWS9 393 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 STX18Q9P2W9 335 aaKnown RBP13.5□□□□□ -0.25
VRK3-212ENST00000596814 KCNE5Q9UJ90 142 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 SLC13A4Q9UKG4 626 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 ZNF232Q9UNY5 417 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 NPFFR2Q9Y5X5 522 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 NINQ8N4C6 2090 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 OR6C70A6NIJ9 312 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 NPIPB9F8W1W9 429 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 SYT5O00445 386 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 HNRNPRO43390 633 aaKnown RBP13.5□□□□□ -0.25
VRK3-212ENST00000596814 TIPRLO75663 272 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 PPM1BO75688 479 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 OR2J2O76002 312 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 BAG2O95816 211 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 MT-ND1P03886 318 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 FCGR1AP12314 374 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 NID1P14543 1247 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 ANPEPP15144 967 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 TNFRSF1BP20333 461 aa13.5□□□□□ -0.25
VRK3-212ENST00000596814 MAGEA2P43356 314 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms