RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 KCNK2O95069 426 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 IL6P05231 212 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 TPOP07202 933 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 KRT16P08779 473 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 NPIPA8P0DM63 369 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 ATP6V1C1P21283 382 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 PTGS2P35354 604 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 MDH1P40925 334 aaKnown RBP10.13□□□□□ -0.79
LIG1-211ENST00000596457 CDKN2CP42773 168 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 MAN2A2P49641 1150 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 CASP6P55212 293 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 C3AR1Q16581 482 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 GRAMD1BQ3KR37 738 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 TIGD2Q4W5G0 525 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 AGKQ53H12 422 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 TNFAIP8L2Q6P589 184 aaPredicted RBP10.13□□□□□ -0.79
LIG1-211ENST00000596457 DNAJC14Q6Y2X3 702 aaPredicted RBP10.13□□□□□ -0.79
LIG1-211ENST00000596457 BNC2Q6ZN30 1099 aaPredicted RBP10.13□□□□□ -0.79
LIG1-211ENST00000596457 MARCH3Q86UD3 253 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 SPPL2CQ8IUH8 684 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 GATSQ8NAP1 163 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 TMEM41AQ96HV5 264 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 CCDC115Q96NT0 180 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 BTBD2Q9BX70 525 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 TMEM120AQ9BXJ8 343 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 TBL1XR1Q9BZK7 514 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 SLC6A15Q9H2J7 730 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 OR51I1Q9H343 314 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 PIGUQ9H490 435 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 RMND5AQ9H871 391 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 SERHLQ9NQF3 203 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 SDR39U1Q9NRG7 319 aaPredicted RBP10.13□□□□□ -0.79
LIG1-211ENST00000596457 GPATCH2Q9NW75 528 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 ALKBH4Q9NXW9 302 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 CCDC167Q9P0B6 97 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 PPP4R1LQ9P1A2 415 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 FREM3P0C091 2139 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 ZGRF1Q86YA3 2104 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 TRGV5A0A0B4J1U4 118 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 C17orf51A8MQB3 221 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 CCL21O00585 134 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 DYNC1I1O14576 645 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 RFXANKO14593 260 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 SNPHO15079 494 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 SLC19A2O60779 497 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 C1QCP02747 245 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 OR12D1P0DN82 309 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 ESRRAP11474 423 aaPredicted RBP10.12□□□□□ -0.79
LIG1-211ENST00000596457 HPGDP15428 266 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 EVI2BP34910 448 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 MAP3K8P41279 467 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 ZFP36L2P47974 494 aaKnown RBP10.12□□□□□ -0.79
LIG1-211ENST00000596457 RNF144AP50876 292 aaPredicted RBP10.12□□□□□ -0.79
LIG1-211ENST00000596457 ARFIP2P53365 341 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 SNTA1Q13424 505 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 SQLEQ14534 574 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 WIPI1Q5MNZ9 446 aaPredicted RBP10.12□□□□□ -0.79
LIG1-211ENST00000596457 C6orf10Q5SRN2 563 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 DCST2Q5T1A1 773 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 FNDC7Q5VTL7 733 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 TIGD3Q6B0B8 471 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 SLC2A7Q6PXP3 512 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 C3P1Q6ZMU1 363 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 OLIG3Q7RTU3 272 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 ZAR1Q86SH2 424 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 YRDCQ86U90 279 aaKnown RBP10.12□□□□□ -0.79
LIG1-211ENST00000596457 TRIML2Q8N7C3 387 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 OR4K17Q8NGC6 315 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 OR5M9Q8NGP3 310 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 PNPT1Q8TCS8 783 aaKnown RBP10.12□□□□□ -0.79
LIG1-211ENST00000596457 XAGE5Q8WWM1 108 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 HOXB13Q92826 284 aaPredicted RBP10.12□□□□□ -0.79
LIG1-211ENST00000596457 RAB8BQ92930 207 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 STACQ99469 402 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 G6PC3Q9BUM1 346 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 DSN1Q9H410 356 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 SERHL2Q9H4I8 314 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 ZNF703Q9H7S9 590 aaPredicted RBP10.12□□□□□ -0.79
LIG1-211ENST00000596457 ZDHHC11Q9H8X9 412 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 SDHAF3Q9NRP4 125 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 DUSP22Q9NRW4 184 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 MED11Q9P086 117 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 TINAGQ9UJW2 476 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 SLC5A6Q9Y289 635 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 C15orf41Q9Y2V0 281 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 SLC6A5Q9Y345 797 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 PCDHGB3Q9Y5G1 929 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 WIF1Q9Y5W5 379 aa10.12□□□□□ -0.79
LIG1-211ENST00000596457 ITPR2Q14571 2701 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 C15orf38-AP3S2A0A0A6YYH1 394 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 PRRG2O14669 202 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 FADS1O60427 444 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 CBR3O75828 277 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 OXSR1O95747 527 aaPredicted RBP10.11□□□□□ -0.79
LIG1-211ENST00000596457 ANGPTL1O95841 491 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 ELAVL4P26378 380 aaKnown RBP10.11□□□□□ -0.79
LIG1-211ENST00000596457 PTPN6P29350 595 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 GYS2P54840 703 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 LRRC74AQ0VAA2 488 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 GPR68Q15743 365 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms