RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 OVOL3O00110 214 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 MANBAO00462 879 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 PCDH7O60245 1069 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 SS18L1O75177 396 aaPredicted RBP8.93□□□□□ -0.98
LIG1-209ENST00000596104 PSMG1O95456 288 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 FCGR2AP12318 317 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 HSD17B3P37058 310 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 RPS3AP61247 264 aaKnown RBP8.93□□□□□ -0.98
LIG1-209ENST00000596104 DMTNQ08495 405 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 ZNF155Q12901 538 aaPredicted RBP8.93□□□□□ -0.98
LIG1-209ENST00000596104 CSTF3Q12996 717 aaKnown RBP8.93□□□□□ -0.98
LIG1-209ENST00000596104 PRSS53Q2L4Q9 553 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 TSNAXIP1Q2TAA8 658 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 CYP27C1Q4G0S4 372 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 MARCH3Q86UD3 253 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 FAM9CQ8IZT9 166 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 CDYL2Q8N8U2 506 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 MAPK1IP1LQ8NDC0 245 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 C16orf78Q8WTQ4 265 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 DUSP19Q8WTR2 217 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 PLPPR2Q96GM1 343 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 GMPPAQ96IJ6 420 aaPredicted RBP8.93□□□□□ -0.98
LIG1-209ENST00000596104 ADGRG7Q96K78 797 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 MRPL57Q9BQC6 102 aaKnown RBP8.93□□□□□ -0.98
LIG1-209ENST00000596104 ACPTQ9BZG2 426 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 RAB17Q9H0T7 212 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 MRPL46Q9H2W6 279 aaKnown RBP8.93□□□□□ -0.98
LIG1-209ENST00000596104 ACSS3Q9H6R3 686 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 PTGES2Q9H7Z7 377 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 SDHAF3Q9NRP4 125 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 GIMAP4Q9NUV9 329 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 CLEC4AQ9UMR7 237 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 EMC9Q9Y3B6 208 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 RTTNQ86VV8 2226 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 ANK3Q12955 4377 aaKnown RBP8.92□□□□□ -0.98
LIG1-209ENST00000596104 DSCAMO60469 2012 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 MYO1GB0I1T2 1018 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 SHISA8B8ZZ34 492 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 RNF223E7ERA6 249 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 COQ9O75208 318 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 IL33O95760 270 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 KRT6AP02538 564 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 KRT6BP04259 564 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 COL6A2P12110 1019 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 PSMB1P20618 241 aaKnown RBP8.92□□□□□ -0.98
LIG1-209ENST00000596104 TIA1P31483 386 aaKnown RBP eCLIP8.92□□□□□ -0.98
LIG1-209ENST00000596104 MPIP34949 423 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 EIF1AXP47813 144 aaKnown RBP8.92□□□□□ -0.98
LIG1-209ENST00000596104 KRT6CP48668 564 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 HTR6P50406 440 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 RPS4XP62701 263 aaKnown RBP8.92□□□□□ -0.98
LIG1-209ENST00000596104 CLCQ05315 142 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 ZNF844Q08AG5 666 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 HEPACAMQ14CZ8 416 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 SGCBQ16585 318 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 CLEC12BQ2HXU8 276 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 CTU2Q2VPK5 515 aaKnown RBP8.92□□□□□ -0.98
LIG1-209ENST00000596104 SH2D4BQ5SQS7 431 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 LGSNQ5TDP6 509 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 ADAM5Q6NVV9 412 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 GALNT18Q6P9A2 607 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 APOOLQ6UXV4 268 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 WFDC8Q8IUA0 241 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 PHC2Q8IXK0 858 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 LILRB1Q8NHL6 650 aaPredicted RBP8.92□□□□□ -0.98
LIG1-209ENST00000596104 AKAP1Q92667 903 aaKnown RBP eCLIP8.92□□□□□ -0.98
LIG1-209ENST00000596104 APIPQ96GX9 242 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 FUT8Q9BYC5 575 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 SHCBP1LQ9BZQ2 653 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 ACTR6Q9GZN1 396 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 OR10A4Q9H209 315 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 ZDHHC18Q9NUE0 388 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 NINJ2Q9NZG7 142 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 DMGDHQ9UI17 866 aaKnown RBP8.92□□□□□ -0.98
LIG1-209ENST00000596104 C19orf53Q9UNZ5 99 aaPredicted RBP8.92□□□□□ -0.98
LIG1-209ENST00000596104 LAMP3Q9UQV4 416 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 GPR52Q9Y2T5 361 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 MXRA5Q9NR99 2828 aa8.92□□□□□ -0.98
LIG1-209ENST00000596104 GNG14A0A1W2PPG7 69 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 ESYT3A0FGR9 886 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 RNF212BA8MTL3 300 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 UPK1AO00322 258 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 EIF1AYO14602 144 aaKnown RBP8.91□□□□□ -0.98
LIG1-209ENST00000596104 JUNP05412 331 aaKnown RBP8.91□□□□□ -0.98
LIG1-209ENST00000596104 THBS1P07996 1170 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 SOD3P08294 240 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 DANCRP0C864 163 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 ZNF17P17021 662 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 DDCP20711 480 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 PSMA4P25789 261 aaKnown RBP8.91□□□□□ -0.98
LIG1-209ENST00000596104 CTBP2P56545 445 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 PRR5P85299 388 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 ACSM2AQ08AH3 577 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 C17orf67Q0P5P2 114 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 VEZF1Q14119 521 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 RASA2Q15283 850 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 ETFDHQ16134 617 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 DECR1Q16698 335 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 UNC50Q53HI1 259 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 SPIN4Q56A73 249 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms