RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 UGT2B28Q9BY64 529 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 SLC6A16Q9GZN6 736 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 COQ10BQ9H8M1 238 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 NEUROD4Q9HD90 331 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 TMEM184CQ9NVA4 438 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 AURKCQ9UQB9 309 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 ERVK-11Q9UQG0 969 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 AP4B1Q9Y6B7 739 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 IGKV1-8A0A0C4DH67 115 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 INAFM1C9JVW0 142 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 H0YGG7 62 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 CLIC1O00299 241 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 PLPP1O14494 284 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 GSTA4O15217 222 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 PDE9AO76083 593 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 RFC3P40938 356 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 ARF3P61204 181 aaPredicted RBP11.83□□□□□ -0.52
SCAF1-202ENST00000595242 TRA2BP62995 288 aaKnown RBP11.83□□□□□ -0.52
SCAF1-202ENST00000595242 NKX6-1P78426 367 aaPredicted RBP11.83□□□□□ -0.52
SCAF1-202ENST00000595242 PPP2R2BQ00005 443 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 MAT1AQ00266 395 aaKnown RBP11.83□□□□□ -0.52
SCAF1-202ENST00000595242 RBBP5Q15291 538 aaKnown RBP11.83□□□□□ -0.52
SCAF1-202ENST00000595242 ADPRMQ3LIE5 342 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 FAM98BQ52LJ0 330 aaKnown RBP11.83□□□□□ -0.52
SCAF1-202ENST00000595242 ZNF468Q5VIY5 522 aaPredicted RBP11.83□□□□□ -0.52
SCAF1-202ENST00000595242 FBXO42Q6P3S6 717 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 ARHGAP11AQ6P4F7 1023 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 PAGE2Q7Z2X7 111 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 CLECL1Q8IZS7 167 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 C10orf111Q8N326 155 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 SLC5A8Q8N695 610 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 POGLUT1Q8NBL1 392 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 M1APQ8TC57 530 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 CREB3L4Q8TEY5 395 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 ZFP90Q8TF47 636 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 PPWD1Q96BP3 646 aaKnown RBP11.83□□□□□ -0.52
SCAF1-202ENST00000595242 AURKBQ96GD4 344 aaPredicted RBP11.83□□□□□ -0.52
SCAF1-202ENST00000595242 QRFPRQ96P65 431 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 C9orf16Q9BUW7 83 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 ACAT2Q9BWD1 397 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 OSBPL11Q9BXB4 747 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 VN1R1Q9GZP7 353 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 SEMA6AQ9H2E6 1030 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 YY1AP1Q9H869 796 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 MMP25Q9NPA2 562 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 DCAF13Q9NV06 445 aaKnown RBP11.83□□□□□ -0.52
SCAF1-202ENST00000595242 C19orf25Q9UFG5 118 aaPredicted RBP11.83□□□□□ -0.52
SCAF1-202ENST00000595242 KLK4Q9Y5K2 254 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 CUBNO60494 3623 aa11.83□□□□□ -0.52
SCAF1-202ENST00000595242 A0A0A6YYC8 382 aaPredicted RBP11.82□□□□□ -0.52
SCAF1-202ENST00000595242 C7orf72A4D263 438 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 I3L1I5 382 aaPredicted RBP11.82□□□□□ -0.52
SCAF1-202ENST00000595242 ACOX3O15254 700 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 NDUFS4O43181 175 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 FOXS1O43638 330 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 GSNP06396 782 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 LYNP07948 512 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 DDX5P17844 614 aaKnown RBP11.82□□□□□ -0.52
SCAF1-202ENST00000595242 AHRP35869 848 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 TXNL4AP83876 142 aaKnown RBP11.82□□□□□ -0.52
SCAF1-202ENST00000595242 CHRNB3Q05901 458 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 VEZF1Q14119 521 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 EXT1Q16394 746 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 MPEG1Q2M385 716 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 VMACQ2NL98 169 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 MINDY4Q4G0A6 757 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 TMEM35AQ53FP2 167 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 MFSD4BQ5TF39 518 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 SHEQ5VZ18 495 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 ZNF425Q6IV72 752 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 UGT2A3Q6UWM9 527 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 ZNF227Q86WZ6 799 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 NUDT13Q86X67 352 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 PTOV1Q86YD1 416 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 LIX1LQ8IVB5 337 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 CIARTQ8N365 385 aaPredicted RBP11.82□□□□□ -0.52
SCAF1-202ENST00000595242 OR2L3Q8NG85 312 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 FIG4Q92562 907 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 PPCDCQ96CD2 204 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 COX4I2Q96KJ9 171 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 SLC29A1Q99808 456 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 CIB1Q99828 191 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 ZFYVE21Q9BQ24 234 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 CHID1Q9BWS9 393 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 CDCP1Q9H5V8 836 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 PIF1Q9H611 641 aa11.82□□□□□ -0.52
SCAF1-202ENST00000595242 SONP18583 2426 aaKnown RBP11.82□□□□□ -0.52
SCAF1-202ENST00000595242 A0A0G2JNJ9 132 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 OR2W5A6NFC9 320 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 A6NHS1 94 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 H7BY64 318 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 UPK1AO00322 258 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 SH3BGRLO75368 114 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 DEAF1O75398 565 aaPredicted RBP11.81□□□□□ -0.52
SCAF1-202ENST00000595242 IL3P08700 152 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 CMPK1P30085 196 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 FRKP42685 505 aaPredicted RBP11.81□□□□□ -0.52
SCAF1-202ENST00000595242 MAGEA2P43356 314 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 CYB561P49447 251 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 MVDP53602 400 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms