RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 C3orf14Q9HBI5 128 aa20.28■□□□□ 0.84
GTF2F1-204ENST00000594965 NPDC1Q9NQX5 325 aaPredicted RBP20.28■□□□□ 0.84
GTF2F1-204ENST00000594965 FAM120CQ9NX05 1096 aaKnown RBP20.28■□□□□ 0.84
GTF2F1-204ENST00000594965 NOP53Q9NZM5 478 aaKnown RBP20.28■□□□□ 0.84
GTF2F1-204ENST00000594965 MRTO4Q9UKD2 239 aaKnown RBP20.28■□□□□ 0.84
GTF2F1-204ENST00000594965 CAMK2AQ9UQM7 478 aa20.28■□□□□ 0.84
GTF2F1-204ENST00000594965 MRPS18CQ9Y3D5 142 aaKnown RBP20.28■□□□□ 0.84
GTF2F1-204ENST00000594965 CENPEQ02224 2701 aa20.28■□□□□ 0.84
GTF2F1-204ENST00000594965 INTS1Q8N201 2190 aaKnown RBP20.28■□□□□ 0.84
GTF2F1-204ENST00000594965 ZIC3O60481 467 aa20.27■□□□□ 0.84
GTF2F1-204ENST00000594965 SLC18A1P54219 525 aa20.27■□□□□ 0.84
GTF2F1-204ENST00000594965 DIO3P55073 304 aa20.27■□□□□ 0.84
GTF2F1-204ENST00000594965 MAD2L1Q13257 205 aaPredicted RBP20.27■□□□□ 0.84
GTF2F1-204ENST00000594965 DUSP5Q16690 384 aa20.27■□□□□ 0.84
GTF2F1-204ENST00000594965 ZCCHC12Q6PEW1 402 aa20.27■□□□□ 0.84
GTF2F1-204ENST00000594965 APOOLQ6UXV4 268 aa20.27■□□□□ 0.84
GTF2F1-204ENST00000594965 SZRD1Q7Z422 152 aa20.27■□□□□ 0.84
GTF2F1-204ENST00000594965 ZAR1Q86SH2 424 aa20.27■□□□□ 0.84
GTF2F1-204ENST00000594965 TRIM42Q8IWZ5 723 aa20.27■□□□□ 0.84
GTF2F1-204ENST00000594965 PM20D2Q8IYS1 436 aa20.27■□□□□ 0.84
GTF2F1-204ENST00000594965 ZNF295-AS1Q8N0V1 137 aa20.27■□□□□ 0.84
GTF2F1-204ENST00000594965 OR2M3Q8NG83 312 aa20.27■□□□□ 0.84
GTF2F1-204ENST00000594965 OR14L1PQ8NHC6 308 aa20.27■□□□□ 0.84
GTF2F1-204ENST00000594965 OR5P2Q8WZ92 322 aa20.27■□□□□ 0.84
GTF2F1-204ENST00000594965 SLC9A6Q92581 669 aa20.27■□□□□ 0.84
GTF2F1-204ENST00000594965 YIPF4Q9BSR8 244 aa20.27■□□□□ 0.84
GTF2F1-204ENST00000594965 NUF2Q9BZD4 464 aa20.27■□□□□ 0.84
GTF2F1-204ENST00000594965 TRIM8Q9BZR9 551 aa20.27■□□□□ 0.84
GTF2F1-204ENST00000594965 DSN1Q9H410 356 aa20.27■□□□□ 0.84
GTF2F1-204ENST00000594965 CXorf36Q9H7Y0 433 aa20.27■□□□□ 0.84
GTF2F1-204ENST00000594965 ZCCHC3Q9NUD5 404 aaKnown RBP20.27■□□□□ 0.84
GTF2F1-204ENST00000594965 TAS2R10Q9NYW0 307 aa20.27■□□□□ 0.84
GTF2F1-204ENST00000594965 PPP4R1LQ9P1A2 415 aa20.27■□□□□ 0.84
GTF2F1-204ENST00000594965 KCNH1O95259 989 aa20.26■□□□□ 0.83
GTF2F1-204ENST00000594965 UTS2O95399 124 aa20.26■□□□□ 0.83
GTF2F1-204ENST00000594965 C6orf47O95873 294 aa20.26■□□□□ 0.83
GTF2F1-204ENST00000594965 IGFBP2P18065 325 aa20.26■□□□□ 0.83
GTF2F1-204ENST00000594965 PSMD4P55036 377 aaKnown RBP20.26■□□□□ 0.83
GTF2F1-204ENST00000594965 PRR5P85299 388 aa20.26■□□□□ 0.83
GTF2F1-204ENST00000594965 GRAMD1BQ3KR37 738 aa20.26■□□□□ 0.83
GTF2F1-204ENST00000594965 VPS26BQ4G0F5 336 aa20.26■□□□□ 0.83
GTF2F1-204ENST00000594965 CAMKMTQ7Z624 323 aa20.26■□□□□ 0.83
GTF2F1-204ENST00000594965 GALNT10Q86SR1 603 aa20.26■□□□□ 0.83
GTF2F1-204ENST00000594965 MARCH3Q86UD3 253 aa20.26■□□□□ 0.83
GTF2F1-204ENST00000594965 NATD1Q8N6N6 113 aa20.26■□□□□ 0.83
GTF2F1-204ENST00000594965 NAXEQ8NCW5 288 aa20.26■□□□□ 0.83
GTF2F1-204ENST00000594965 TNIP2Q8NFZ5 429 aa20.26■□□□□ 0.83
GTF2F1-204ENST00000594965 MGARPQ8TDB4 240 aa20.26■□□□□ 0.83
GTF2F1-204ENST00000594965 OTUB1Q96FW1 271 aaPredicted RBP20.26■□□□□ 0.83
GTF2F1-204ENST00000594965 SPOCK3Q9BQ16 436 aa20.26■□□□□ 0.83
GTF2F1-204ENST00000594965 DUSP26Q9BV47 211 aa20.26■□□□□ 0.83
GTF2F1-204ENST00000594965 BHLHE41Q9C0J9 482 aaPredicted RBP20.26■□□□□ 0.83
GTF2F1-204ENST00000594965 KCNJ16Q9NPI9 418 aa20.26■□□□□ 0.83
GTF2F1-204ENST00000594965 ATAD3AQ9NVI7 634 aa20.26■□□□□ 0.83
GTF2F1-204ENST00000594965 FBXO34Q9NWN3 711 aa20.26■□□□□ 0.83
GTF2F1-204ENST00000594965 MED11Q9P086 117 aa20.26■□□□□ 0.83
GTF2F1-204ENST00000594965 SNNO75324 88 aaPredicted RBP20.25■□□□□ 0.83
GTF2F1-204ENST00000594965 KCNK2O95069 426 aa20.25■□□□□ 0.83
GTF2F1-204ENST00000594965 HMGN2P05204 90 aaKnown RBP20.25■□□□□ 0.83
GTF2F1-204ENST00000594965 DPP4P27487 766 aa20.25■□□□□ 0.83
GTF2F1-204ENST00000594965 CEACAM8P31997 349 aaPredicted RBP20.25■□□□□ 0.83
GTF2F1-204ENST00000594965 STARP49675 285 aa20.25■□□□□ 0.83
GTF2F1-204ENST00000594965 B3GALT5-AS1P59052 145 aa20.25■□□□□ 0.83
GTF2F1-204ENST00000594965 STX5Q13190 355 aa20.25■□□□□ 0.83
GTF2F1-204ENST00000594965 IFNEQ86WN2 208 aa20.25■□□□□ 0.83
GTF2F1-204ENST00000594965 MED12LQ86YW9 2145 aa20.25■□□□□ 0.83
GTF2F1-204ENST00000594965 OR4K17Q8NGC6 315 aa20.25■□□□□ 0.83
GTF2F1-204ENST00000594965 PRPF18Q99633 342 aaKnown RBP20.25■□□□□ 0.83
GTF2F1-204ENST00000594965 RUBCNLQ9H714 662 aa20.25■□□□□ 0.83
GTF2F1-204ENST00000594965 MEAF6Q9HAF1 191 aa20.25■□□□□ 0.83
GTF2F1-204ENST00000594965 DKKL1Q9UK85 242 aa20.25■□□□□ 0.83
GTF2F1-204ENST00000594965 SNX8Q9Y5X2 465 aa20.25■□□□□ 0.83
GTF2F1-204ENST00000594965 ANKRD28O15084 1053 aa20.24■□□□□ 0.83
GTF2F1-204ENST00000594965 ALOX5P09917 674 aa20.24■□□□□ 0.83
GTF2F1-204ENST00000594965 CPN1P15169 458 aa20.24■□□□□ 0.83
GTF2F1-204ENST00000594965 MSX1P28360 303 aa20.24■□□□□ 0.83
GTF2F1-204ENST00000594965 TIMP3P35625 211 aa20.24■□□□□ 0.83
GTF2F1-204ENST00000594965 CCT3P49368 545 aaKnown RBP20.24■□□□□ 0.83
GTF2F1-204ENST00000594965 PRIM2P49643 509 aa20.24■□□□□ 0.83
GTF2F1-204ENST00000594965 LHX2P50458 406 aa20.24■□□□□ 0.83
GTF2F1-204ENST00000594965 DSCR4P56555 118 aaPredicted RBP20.24■□□□□ 0.83
GTF2F1-204ENST00000594965 CASP8Q14790 479 aa20.24■□□□□ 0.83
GTF2F1-204ENST00000594965 LASP1Q14847 261 aaKnown RBP20.24■□□□□ 0.83
GTF2F1-204ENST00000594965 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.24■□□□□ 0.83
GTF2F1-204ENST00000594965 LSM12Q3MHD2 195 aaKnown RBP20.24■□□□□ 0.83
GTF2F1-204ENST00000594965 NSUN5P2Q63ZY6 315 aa20.24■□□□□ 0.83
GTF2F1-204ENST00000594965 FIGNL1Q6PIW4 674 aa20.24■□□□□ 0.83
GTF2F1-204ENST00000594965 POMZP3Q6PJE2 187 aa20.24■□□□□ 0.83
GTF2F1-204ENST00000594965 LACC1Q8IV20 430 aa20.24■□□□□ 0.83
GTF2F1-204ENST00000594965 KIRREL3Q8IZU9 778 aa20.24■□□□□ 0.83
GTF2F1-204ENST00000594965 ZPLD1Q8TCW7 415 aa20.24■□□□□ 0.83
GTF2F1-204ENST00000594965 DUSP19Q8WTR2 217 aa20.24■□□□□ 0.83
GTF2F1-204ENST00000594965 SDHAF3Q9NRP4 125 aa20.24■□□□□ 0.83
GTF2F1-204ENST00000594965 GPATCH2Q9NW75 528 aa20.24■□□□□ 0.83
GTF2F1-204ENST00000594965 RPH3AQ9Y2J0 694 aaPredicted RBP20.24■□□□□ 0.83
GTF2F1-204ENST00000594965 IGLV3-32A0A0A0MS00 114 aa20.23■□□□□ 0.83
GTF2F1-204ENST00000594965 CD8B2A6NJW9 211 aa20.23■□□□□ 0.83
GTF2F1-204ENST00000594965 ANGPTL1O95841 491 aa20.23■□□□□ 0.83
GTF2F1-204ENST00000594965 TCEA1P23193 301 aaKnown RBP20.23■□□□□ 0.83
GTF2F1-204ENST00000594965 HBA1P69905 142 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms