RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 COQ9O75208 318 aa15.96■□□□□ 0.15
SHKBP1-203ENST00000594298 SNNO75324 88 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-203ENST00000594298 CBX7O95931 251 aa15.96■□□□□ 0.15
SHKBP1-203ENST00000594298 JUNP05412 331 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-203ENST00000594298 IFI6P09912 130 aa15.96■□□□□ 0.15
SHKBP1-203ENST00000594298 MRPS35P82673 323 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-203ENST00000594298 EXOSC7Q15024 291 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-203ENST00000594298 TOMM20Q15388 145 aa15.96■□□□□ 0.15
SHKBP1-203ENST00000594298 DEFB113Q30KQ7 82 aa15.96■□□□□ 0.15
SHKBP1-203ENST00000594298 WIPI1Q5MNZ9 446 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-203ENST00000594298 OR1J4Q8NGS1 313 aa15.96■□□□□ 0.15
SHKBP1-203ENST00000594298 CLHC1Q8NHS4 586 aa15.96■□□□□ 0.15
SHKBP1-203ENST00000594298 KAT2AQ92830 837 aa15.96■□□□□ 0.15
SHKBP1-203ENST00000594298 ZBED6CLQ96FA7 236 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-203ENST00000594298 LCORQ96JN0 433 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-203ENST00000594298 NXF5Q9H1B4 397 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-203ENST00000594298 PLEKHF2Q9H8W4 249 aa15.96■□□□□ 0.15
SHKBP1-203ENST00000594298 ATAD3AQ9NVI7 634 aa15.96■□□□□ 0.15
SHKBP1-203ENST00000594298 PNPOQ9NVS9 261 aa15.96■□□□□ 0.15
SHKBP1-203ENST00000594298 NOP53Q9NZM5 478 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-203ENST00000594298 TRPC5OSA6NMA1 111 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 PLOD2O00469 737 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 KLF11O14901 512 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 PPM1BO75688 479 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 CPN1P15169 458 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 PRPS1L1P21108 318 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 DRD5P21918 477 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 PPICP45877 212 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 SNTA1Q13424 505 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 PDE7AQ13946 482 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 KEAP1Q14145 624 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 RCAN2Q14206 197 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 TTMPQ5BVD1 217 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 FBXW10Q5XX13 1052 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 SLC30A6Q6NXT4 461 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 NUP54Q7Z3B4 507 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 PRR22Q8IZ63 422 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 C9orf106Q8NAJ2 232 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 FAM83FQ8NEG4 500 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 HGDQ93099 445 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 ZFP3Q96NJ6 502 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 AMDHD1Q96NU7 426 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 C1orf50Q9BV19 199 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 GLIPR2Q9H4G4 154 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 GSX1Q9H4S2 264 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 METTL7AQ9H8H3 244 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 AKTIPQ9H8T0 292 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 ASIC5Q9NY37 505 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 GIMAP2Q9UG22 337 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 ATP6V1HQ9UI12 483 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 DTX4Q9Y2E6 619 aa15.95■□□□□ 0.14
SHKBP1-203ENST00000594298 EEF1E1-BLOC1S5C9J1V9 151 aa15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 GNB5O14775 395 aa15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 SNPHO15079 494 aa15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 EEF1E1O43324 174 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 TMIGD3P0DMS9 266 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 CYP4B1P13584 511 aa15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 GPC1P35052 558 aa15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 GCKP35557 465 aa15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 PTGDSP41222 190 aa15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 EMDP50402 254 aa15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 AGFG1P52594 562 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 MANFP55145 182 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 PRSS53Q2L4Q9 553 aa15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 CPTPQ5TA50 214 aa15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 ANGPTL8Q6UXH0 198 aa15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 ADGRE4PQ86SQ3 457 aa15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 LINC01560Q8TB33 94 aa15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 DYDC1Q8WWB3 177 aa15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 ZNF75CPQ92670 426 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 PPP1R36Q96LQ0 422 aa15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 DACH2Q96NX9 599 aa15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 UCN2Q96RP3 112 aa15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 SFXN3Q9BWM7 321 aa15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 ITPAQ9BY32 194 aa15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 NUF2Q9BZD4 464 aa15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 MEAF6Q9HAF1 191 aa15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 ACSS1Q9NUB1 689 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 DDX18Q9NVP1 670 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 C19orf53Q9UNZ5 99 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-203ENST00000594298 CLCA1A8K7I4 914 aa15.93■□□□□ 0.14
SHKBP1-203ENST00000594298 SCAMP2O15127 329 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-203ENST00000594298 HDAC3O15379 428 aa15.93■□□□□ 0.14
SHKBP1-203ENST00000594298 ICOSLGO75144 302 aa15.93■□□□□ 0.14
SHKBP1-203ENST00000594298 ERN1O75460 977 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-203ENST00000594298 RCBTB2O95199 551 aa15.93■□□□□ 0.14
SHKBP1-203ENST00000594298 LBPP18428 481 aa15.93■□□□□ 0.14
SHKBP1-203ENST00000594298 HOXC12P31275 282 aa15.93■□□□□ 0.14
SHKBP1-203ENST00000594298 SOX18P35713 384 aa15.93■□□□□ 0.14
SHKBP1-203ENST00000594298 ANKRD26P1Q6NSI1 321 aa15.93■□□□□ 0.14
SHKBP1-203ENST00000594298 YRDCQ86U90 279 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-203ENST00000594298 OR7G2Q8NG99 324 aa15.93■□□□□ 0.14
SHKBP1-203ENST00000594298 LRRC8CQ8TDW0 803 aa15.93■□□□□ 0.14
SHKBP1-203ENST00000594298 OMA1Q96E52 524 aa15.93■□□□□ 0.14
SHKBP1-203ENST00000594298 ELP4Q96EB1 424 aa15.93■□□□□ 0.14
SHKBP1-203ENST00000594298 NODALQ96S42 347 aa15.93■□□□□ 0.14
SHKBP1-203ENST00000594298 OSBPL11Q9BXB4 747 aa15.93■□□□□ 0.14
SHKBP1-203ENST00000594298 OR2B2Q9GZK3 357 aa15.93■□□□□ 0.14
SHKBP1-203ENST00000594298 GPR55Q9Y2T6 319 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-203ENST00000594298 FRG2CA6NGY1 282 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms