RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 UGT2B11O75310 529 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 PDE9AO76083 593 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 MFN2O95140 757 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 AGR2O95994 175 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 ISL1P61371 349 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 GNA13Q14344 377 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 ELAVL1Q15717 326 aaKnown RBP12.27□□□□□ -0.44
VRK3-205ENST00000593919 DUSP7Q16829 419 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 IQCCQ4KMZ1 466 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 LAIR2Q6ISS4 152 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 LANCL3Q6ZV70 420 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 GLRX5Q86SX6 157 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 DEFB124Q8NES8 71 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 BBS10Q8TAM1 723 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 LZICQ8WZA0 190 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 HOXB13Q92826 284 aaPredicted RBP12.27□□□□□ -0.44
VRK3-205ENST00000593919 LIN37Q96GY3 246 aaPredicted RBP12.27□□□□□ -0.44
VRK3-205ENST00000593919 COL21A1Q96P44 957 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 TRNT1Q96Q11 434 aaKnown RBP12.27□□□□□ -0.44
VRK3-205ENST00000593919 ZNF607Q96SK3 696 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 RSPO3Q9BXY4 272 aaPredicted RBP12.27□□□□□ -0.44
VRK3-205ENST00000593919 OR10A5Q9H207 317 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 SLC38A1Q9H2H9 487 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 FOLH1BQ9HBA9 442 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 BCL2L10Q9HD36 194 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 DUSP22Q9NRW4 184 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 KRT84Q9NSB2 600 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 ETAA1Q9NY74 926 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 BLOC1S6Q9UL45 172 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 LIPT1Q9Y234 373 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 DTX4Q9Y2E6 619 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 TESMINQ9Y4I5 508 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 HEMK1Q9Y5R4 338 aaPredicted RBP12.27□□□□□ -0.44
VRK3-205ENST00000593919 GPC6Q9Y625 555 aaPredicted RBP12.27□□□□□ -0.44
VRK3-205ENST00000593919 TEX51A0A1B0GUA7 166 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.27□□□□□ -0.45
VRK3-205ENST00000593919 VSTM2BA6NLU5 285 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 IDSB3KWA1 339 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 TMX2-CTNND1H3BSU7 103 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 SLC1A7O00341 560 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 CNOT3O75175 753 aaKnown RBP12.27□□□□□ -0.45
VRK3-205ENST00000593919 ZIC2O95409 532 aaPredicted RBP12.27□□□□□ -0.45
VRK3-205ENST00000593919 MT-CO3P00414 261 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 CLPSP04118 112 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 ALOX5P09917 674 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 TTKP33981 857 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 OR1E2P47887 323 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 CLK3P49761 638 aaKnown RBP12.27□□□□□ -0.45
VRK3-205ENST00000593919 RAB15P59190 212 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 PSG6Q00889 435 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 TOP3AQ13472 1001 aaPredicted RBP12.27□□□□□ -0.45
VRK3-205ENST00000593919 IL18R1Q13478 541 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 CYP27C1Q4G0S4 372 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 HES3Q5TGS1 186 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 PRAMEF8Q5VWM4 474 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 PRAMEF7Q5VXH5 474 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 FAAH2Q6GMR7 532 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 SLCO6A1Q86UG4 719 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 ZNF615Q8N8J6 731 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 PLPP5Q8NEB5 264 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 BPIFB6Q8NFQ5 453 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 C16orf52Q8NHV5 167 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 GPR151Q8TDV0 419 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 PIK3R3Q92569 461 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 SENP5Q96HI0 755 aaPredicted RBP12.27□□□□□ -0.45
VRK3-205ENST00000593919 VSTM2LQ96N03 204 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 STACQ99469 402 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 NAA50Q9GZZ1 169 aaKnown RBP12.27□□□□□ -0.45
VRK3-205ENST00000593919 SEC14L3Q9UDX4 400 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 PADI2Q9Y2J8 665 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 GMPPBQ9Y5P6 360 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 CLCA3PQ9Y6N3 262 aa12.27□□□□□ -0.45
VRK3-205ENST00000593919 DSPPQ9NZW4 1301 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 PTGES3LE9PB15 166 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 FCMRO60667 390 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 HEXBP07686 556 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 RYKP34925 604 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 GABARAPL2P60520 117 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 HPCAP84074 193 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 CHRNEQ04844 493 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 CDK5R2Q13319 367 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 ARHGAP11BQ3KRB8 267 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 IFI44LQ53G44 452 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 CCNJQ5T5M9 372 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 DCAF12Q5T6F0 453 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 MRPL14Q6P1L8 145 aaKnown RBP12.26□□□□□ -0.45
VRK3-205ENST00000593919 FAM199XQ6PEV8 388 aaPredicted RBP12.26□□□□□ -0.45
VRK3-205ENST00000593919 HMGN2P46Q86SG4 172 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 KRT73Q86Y46 540 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 ARMC8Q8IUR7 673 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 ZNF321PQ8N8H1 164 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 COX18Q8N8Q8 333 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 SETD9Q8NE22 299 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 FKBP10Q96AY3 582 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 NRBF2Q96F24 287 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 LRFN5Q96NI6 719 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 SPSB2Q99619 263 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 EPYCQ99645 322 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 DCUN1D5Q9BTE7 237 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 LMF2Q9BU23 707 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms