RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 PRSS57Q6UWY2 283 aa14.71□□□□□ -0.05
LIG1-205ENST00000593425 C1GALT1C1Q96EU7 318 aa14.71□□□□□ -0.05
LIG1-205ENST00000593425 FMO2Q99518 471 aa14.71□□□□□ -0.05
LIG1-205ENST00000593425 SLC39A3Q9BRY0 314 aa14.71□□□□□ -0.05
LIG1-205ENST00000593425 PROCRQ9UNN8 238 aa14.71□□□□□ -0.05
LIG1-205ENST00000593425 ABCG2Q9UNQ0 655 aa14.71□□□□□ -0.05
LIG1-205ENST00000593425 ZNF175Q9Y473 711 aa14.71□□□□□ -0.05
LIG1-205ENST00000593425 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.71□□□□□ -0.05
LIG1-205ENST00000593425 A0A087WV62 115 aa14.7□□□□□ -0.06
LIG1-205ENST00000593425 KIAA1324LA8MWY0 1029 aaPredicted RBP14.7□□□□□ -0.06
LIG1-205ENST00000593425 SHISA8B8ZZ34 492 aa14.7□□□□□ -0.06
LIG1-205ENST00000593425 AQP8O94778 261 aa14.7□□□□□ -0.06
LIG1-205ENST00000593425 PSMG1O95456 288 aa14.7□□□□□ -0.06
LIG1-205ENST00000593425 SNRPAP09012 282 aaKnown RBP14.7□□□□□ -0.06
LIG1-205ENST00000593425 ANXA4P09525 319 aaPredicted RBP14.7□□□□□ -0.06
LIG1-205ENST00000593425 DDCP20711 480 aa14.7□□□□□ -0.06
LIG1-205ENST00000593425 GCAP28676 217 aa14.7□□□□□ -0.06
LIG1-205ENST00000593425 NCBP2P52298 156 aaKnown RBP eCLIP14.7□□□□□ -0.06
LIG1-205ENST00000593425 ZNF763Q0D2J5 394 aa14.7□□□□□ -0.06
LIG1-205ENST00000593425 C2orf80Q0P641 193 aa14.7□□□□□ -0.06
LIG1-205ENST00000593425 CYP27C1Q4G0S4 372 aa14.7□□□□□ -0.06
LIG1-205ENST00000593425 C20orf204Q6ZNR8 217 aa14.7□□□□□ -0.06
LIG1-205ENST00000593425 MARCH3Q86UD3 253 aa14.7□□□□□ -0.06
LIG1-205ENST00000593425 METTL25Q8N6Q8 603 aa14.7□□□□□ -0.06
LIG1-205ENST00000593425 DUSP19Q8WTR2 217 aa14.7□□□□□ -0.06
LIG1-205ENST00000593425 BDH2Q9BUT1 245 aa14.7□□□□□ -0.06
LIG1-205ENST00000593425 PTGES2Q9H7Z7 377 aa14.7□□□□□ -0.06
LIG1-205ENST00000593425 SDHAF3Q9NRP4 125 aa14.7□□□□□ -0.06
LIG1-205ENST00000593425 FAM120CQ9NX05 1096 aaKnown RBP14.7□□□□□ -0.06
LIG1-205ENST00000593425 SIRT5Q9NXA8 310 aa14.7□□□□□ -0.06
LIG1-205ENST00000593425 C19orf53Q9UNZ5 99 aaPredicted RBP14.7□□□□□ -0.06
LIG1-205ENST00000593425 A0A087WUV0 522 aaPredicted RBP14.69□□□□□ -0.06
LIG1-205ENST00000593425 UPK1AO00322 258 aa14.69□□□□□ -0.06
LIG1-205ENST00000593425 GMFGO60234 142 aa14.69□□□□□ -0.06
LIG1-205ENST00000593425 IL33O95760 270 aa14.69□□□□□ -0.06
LIG1-205ENST00000593425 ENO1P06733 434 aaKnown RBP14.69□□□□□ -0.06
LIG1-205ENST00000593425 THBDP07204 575 aa14.69□□□□□ -0.06
LIG1-205ENST00000593425 IMPDH1P20839 514 aa14.69□□□□□ -0.06
LIG1-205ENST00000593425 RFX3P48380 749 aa14.69□□□□□ -0.06
LIG1-205ENST00000593425 FOXA1P55317 472 aa14.69□□□□□ -0.06
LIG1-205ENST00000593425 LCP2Q13094 533 aa14.69□□□□□ -0.06
LIG1-205ENST00000593425 DECR1Q16698 335 aa14.69□□□□□ -0.06
LIG1-205ENST00000593425 FAM71E1Q6IPT2 247 aa14.69□□□□□ -0.06
LIG1-205ENST00000593425 APOOLQ6UXV4 268 aa14.69□□□□□ -0.06
LIG1-205ENST00000593425 GGNQ86UU5 652 aa14.69□□□□□ -0.06
LIG1-205ENST00000593425 IFT81Q8WYA0 676 aa14.69□□□□□ -0.06
LIG1-205ENST00000593425 ANP32BQ92688 251 aaKnown RBP14.69□□□□□ -0.06
LIG1-205ENST00000593425 L3HYPDHQ96EM0 354 aa14.69□□□□□ -0.06
LIG1-205ENST00000593425 MDFIQ99750 246 aa14.69□□□□□ -0.06
LIG1-205ENST00000593425 SHCBP1LQ9BZQ2 653 aa14.69□□□□□ -0.06
LIG1-205ENST00000593425 KLHL4Q9C0H6 718 aa14.69□□□□□ -0.06
LIG1-205ENST00000593425 GLIPR2Q9H4G4 154 aa14.69□□□□□ -0.06
LIG1-205ENST00000593425 Q9N2J8 555 aa14.69□□□□□ -0.06
LIG1-205ENST00000593425 NFU1Q9UMS0 254 aa14.69□□□□□ -0.06
LIG1-205ENST00000593425 EXOC1LA0A1B0GW35 172 aa14.68□□□□□ -0.06
LIG1-205ENST00000593425 LINC01387J3KSC0 135 aa14.68□□□□□ -0.06
LIG1-205ENST00000593425 TBXA2RP21731 343 aa14.68□□□□□ -0.06
LIG1-205ENST00000593425 ATP5F1P24539 256 aaPredicted RBP14.68□□□□□ -0.06
LIG1-205ENST00000593425 GSTM5P46439 218 aa14.68□□□□□ -0.06
LIG1-205ENST00000593425 SLC6A8P48029 635 aa14.68□□□□□ -0.06
LIG1-205ENST00000593425 PTH2RP49190 550 aa14.68□□□□□ -0.06
LIG1-205ENST00000593425 PRKAA2P54646 552 aa14.68□□□□□ -0.06
LIG1-205ENST00000593425 PKNOX1P55347 436 aa14.68□□□□□ -0.06
LIG1-205ENST00000593425 RPS3AP61247 264 aaKnown RBP14.68□□□□□ -0.06
LIG1-205ENST00000593425 FGFBP1Q14512 234 aa14.68□□□□□ -0.06
LIG1-205ENST00000593425 EXOC3L2Q2M3D2 409 aa14.68□□□□□ -0.06
LIG1-205ENST00000593425 TMEM44Q2T9K0 475 aa14.68□□□□□ -0.06
LIG1-205ENST00000593425 LGSNQ5TDP6 509 aa14.68□□□□□ -0.06
LIG1-205ENST00000593425 TIFABQ6ZNK6 161 aa14.68□□□□□ -0.06
LIG1-205ENST00000593425 FAM214BQ7L5A3 538 aa14.68□□□□□ -0.06
LIG1-205ENST00000593425 OR2L13Q8N349 312 aa14.68□□□□□ -0.06
LIG1-205ENST00000593425 NOA1Q8NC60 698 aaKnown RBP14.68□□□□□ -0.06
LIG1-205ENST00000593425 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.68□□□□□ -0.06
LIG1-205ENST00000593425 IGFBPL1Q8WX77 278 aa14.68□□□□□ -0.06
LIG1-205ENST00000593425 CAVIN3Q969G5 261 aa14.68□□□□□ -0.06
LIG1-205ENST00000593425 LMF2Q9BU23 707 aaKnown RBP14.68□□□□□ -0.06
LIG1-205ENST00000593425 GSX2Q9BZM3 304 aa14.68□□□□□ -0.06
LIG1-205ENST00000593425 TSPYL1Q9H0U9 437 aa14.68□□□□□ -0.06
LIG1-205ENST00000593425 GSTO2Q9H4Y5 243 aa14.68□□□□□ -0.06
LIG1-205ENST00000593425 MIEF1Q9NQG6 463 aa14.68□□□□□ -0.06
LIG1-205ENST00000593425 DDX18Q9NVP1 670 aaKnown RBP14.68□□□□□ -0.06
LIG1-205ENST00000593425 CLEC4AQ9UMR7 237 aa14.68□□□□□ -0.06
LIG1-205ENST00000593425 STK38LQ9Y2H1 464 aa14.68□□□□□ -0.06
LIG1-205ENST00000593425 POLR3HQ9Y535 204 aaPredicted RBP14.68□□□□□ -0.06
LIG1-205ENST00000593425 AP4B1Q9Y6B7 739 aa14.68□□□□□ -0.06
LIG1-205ENST00000593425 ARID1AO14497 2285 aa14.68□□□□□ -0.06
LIG1-205ENST00000593425 IGLV3-32A0A0A0MS00 114 aa14.67□□□□□ -0.06
LIG1-205ENST00000593425 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.67□□□□□ -0.06
LIG1-205ENST00000593425 GXYLT2A0PJZ3 443 aa14.67□□□□□ -0.06
LIG1-205ENST00000593425 SERTM1A2A2V5 107 aa14.67□□□□□ -0.06
LIG1-205ENST00000593425 INAFM1C9JVW0 142 aa14.67□□□□□ -0.06
LIG1-205ENST00000593425 UBFD1O14562 309 aaKnown RBP14.67□□□□□ -0.06
LIG1-205ENST00000593425 SLITRK5O94991 958 aa14.67□□□□□ -0.06
LIG1-205ENST00000593425 ANGPTL1O95841 491 aa14.67□□□□□ -0.06
LIG1-205ENST00000593425 IGKV1D-16P01601 117 aa14.67□□□□□ -0.06
LIG1-205ENST00000593425 SGCBQ16585 318 aa14.67□□□□□ -0.06
LIG1-205ENST00000593425 GLYR1Q49A26 553 aaPredicted RBP14.67□□□□□ -0.06
LIG1-205ENST00000593425 SPDYAQ5MJ70 313 aa14.67□□□□□ -0.06
LIG1-205ENST00000593425 PPP4R4Q6NUP7 873 aa14.67□□□□□ -0.06
LIG1-205ENST00000593425 SLC22A9Q8IVM8 553 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms