RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 C6orf203Q9P0P8 240 aaPredicted RBP18.47■□□□□ 0.55
TRIM47-207ENST00000593089 FLNAP21333 2647 aaKnown RBP18.46■□□□□ 0.55
TRIM47-207ENST00000593089 GMFGO60234 142 aa18.46■□□□□ 0.55
TRIM47-207ENST00000593089 GLRA3O75311 464 aa18.46■□□□□ 0.55
TRIM47-207ENST00000593089 PSMG1O95456 288 aa18.46■□□□□ 0.55
TRIM47-207ENST00000593089 IL33O95760 270 aa18.46■□□□□ 0.55
TRIM47-207ENST00000593089 HOXC12P31275 282 aa18.46■□□□□ 0.55
TRIM47-207ENST00000593089 EEFSECP57772 596 aaKnown RBP18.46■□□□□ 0.55
TRIM47-207ENST00000593089 GANABQ14697 944 aaKnown RBP18.46■□□□□ 0.55
TRIM47-207ENST00000593089 NOXRED1Q6NXP6 359 aa18.46■□□□□ 0.55
TRIM47-207ENST00000593089 FRMD7Q6ZUT3 714 aa18.46■□□□□ 0.55
TRIM47-207ENST00000593089 BTLAQ7Z6A9 289 aa18.46■□□□□ 0.55
TRIM47-207ENST00000593089 WFIKKN1Q96NZ8 548 aa18.46■□□□□ 0.55
TRIM47-207ENST00000593089 RRAGDQ9NQL2 400 aaPredicted RBP18.46■□□□□ 0.55
TRIM47-207ENST00000593089 BEX4Q9NWD9 120 aaPredicted RBP18.46■□□□□ 0.55
TRIM47-207ENST00000593089 FAM120CQ9NX05 1096 aaKnown RBP18.46■□□□□ 0.55
TRIM47-207ENST00000593089 KLHL28Q9NXS3 571 aa18.46■□□□□ 0.55
TRIM47-207ENST00000593089 MRTO4Q9UKD2 239 aaKnown RBP18.46■□□□□ 0.55
TRIM47-207ENST00000593089 OR2M5A3KFT3 312 aa18.45■□□□□ 0.54
TRIM47-207ENST00000593089 RSL1D1O76021 490 aaKnown RBP18.45■□□□□ 0.54
TRIM47-207ENST00000593089 PROCP04070 461 aa18.45■□□□□ 0.54
TRIM47-207ENST00000593089 CD79BP40259 229 aa18.45■□□□□ 0.54
TRIM47-207ENST00000593089 KIR2DL2P43627 348 aaPredicted RBP18.45■□□□□ 0.54
TRIM47-207ENST00000593089 PSMD4P55036 377 aaKnown RBP18.45■□□□□ 0.54
TRIM47-207ENST00000593089 CLDN20P56880 219 aa18.45■□□□□ 0.54
TRIM47-207ENST00000593089 CFAP157Q5JU67 520 aa18.45■□□□□ 0.54
TRIM47-207ENST00000593089 ZNF474Q6S9Z5 364 aaPredicted RBP18.45■□□□□ 0.54
TRIM47-207ENST00000593089 TRIM46Q7Z4K8 759 aa18.45■□□□□ 0.54
TRIM47-207ENST00000593089 FAM76AQ8TAV0 307 aa18.45■□□□□ 0.54
TRIM47-207ENST00000593089 GFM2Q969S9 779 aaKnown RBP18.45■□□□□ 0.54
TRIM47-207ENST00000593089 ZNF845Q96IR2 970 aaPredicted RBP18.45■□□□□ 0.54
TRIM47-207ENST00000593089 EGLN2Q96KS0 407 aa18.45■□□□□ 0.54
TRIM47-207ENST00000593089 RHOXF2Q9BQY4 288 aa18.45■□□□□ 0.54
TRIM47-207ENST00000593089 PIGQQ9BRB3 760 aa18.45■□□□□ 0.54
TRIM47-207ENST00000593089 LMF2Q9BU23 707 aaKnown RBP18.45■□□□□ 0.54
TRIM47-207ENST00000593089 TNFRSF12AQ9NP84 129 aa18.45■□□□□ 0.54
TRIM47-207ENST00000593089 EQTNQ9NQ60 294 aa18.45■□□□□ 0.54
TRIM47-207ENST00000593089 WBP11Q9Y2W2 641 aaKnown RBP18.45■□□□□ 0.54
TRIM47-207ENST00000593089 GXYLT2A0PJZ3 443 aa18.44■□□□□ 0.54
TRIM47-207ENST00000593089 CTIFO43310 598 aaKnown RBP18.44■□□□□ 0.54
TRIM47-207ENST00000593089 SEC22BO75396 215 aa18.44■□□□□ 0.54
TRIM47-207ENST00000593089 TNFRSF21O75509 655 aa18.44■□□□□ 0.54
TRIM47-207ENST00000593089 UTS2O95399 124 aa18.44■□□□□ 0.54
TRIM47-207ENST00000593089 POU2F1P14859 743 aa18.44■□□□□ 0.54
TRIM47-207ENST00000593089 GABRA3P34903 492 aa18.44■□□□□ 0.54
TRIM47-207ENST00000593089 KCNJ5P48544 419 aa18.44■□□□□ 0.54
TRIM47-207ENST00000593089 NKX6-1P78426 367 aaPredicted RBP18.44■□□□□ 0.54
TRIM47-207ENST00000593089 HSPB3Q12988 150 aa18.44■□□□□ 0.54
TRIM47-207ENST00000593089 PON3Q15166 354 aa18.44■□□□□ 0.54
TRIM47-207ENST00000593089 IKBIPQ70UQ0 350 aa18.44■□□□□ 0.54
TRIM47-207ENST00000593089 ZNF551Q7Z340 670 aaPredicted RBP18.44■□□□□ 0.54
TRIM47-207ENST00000593089 KRTAP1-3Q8IUG1 177 aa18.44■□□□□ 0.54
TRIM47-207ENST00000593089 GSPT2Q8IYD1 628 aaKnown RBP18.44■□□□□ 0.54
TRIM47-207ENST00000593089 CEP112Q8N8E3 955 aa18.44■□□□□ 0.54
TRIM47-207ENST00000593089 FNDC9Q8TBE3 224 aa18.44■□□□□ 0.54
TRIM47-207ENST00000593089 PIK3R3Q92569 461 aa18.44■□□□□ 0.54
TRIM47-207ENST00000593089 C1GALT1C1Q96EU7 318 aa18.44■□□□□ 0.54
TRIM47-207ENST00000593089 SMR3AQ99954 134 aa18.44■□□□□ 0.54
TRIM47-207ENST00000593089 TXLNGYQ9BZA5 131 aa18.44■□□□□ 0.54
TRIM47-207ENST00000593089 TBL1XR1Q9BZK7 514 aa18.44■□□□□ 0.54
TRIM47-207ENST00000593089 C3orf14Q9HBI5 128 aa18.44■□□□□ 0.54
TRIM47-207ENST00000593089 SHISA8B8ZZ34 492 aa18.43■□□□□ 0.54
TRIM47-207ENST00000593089 H3BQF6 201 aa18.43■□□□□ 0.54
TRIM47-207ENST00000593089 LINC01387J3KSC0 135 aa18.43■□□□□ 0.54
TRIM47-207ENST00000593089 SIAH2O43255 324 aa18.43■□□□□ 0.54
TRIM47-207ENST00000593089 ANGPTL1O95841 491 aa18.43■□□□□ 0.54
TRIM47-207ENST00000593089 NAA20P61599 178 aa18.43■□□□□ 0.54
TRIM47-207ENST00000593089 GRAMD1BQ3KR37 738 aa18.43■□□□□ 0.54
TRIM47-207ENST00000593089 CLEC6AQ6EIG7 209 aa18.43■□□□□ 0.54
TRIM47-207ENST00000593089 ANKRD26P1Q6NSI1 321 aa18.43■□□□□ 0.54
TRIM47-207ENST00000593089 CCDC63Q8NA47 563 aa18.43■□□□□ 0.54
TRIM47-207ENST00000593089 PIK3IP1Q96FE7 263 aa18.43■□□□□ 0.54
TRIM47-207ENST00000593089 C18orf12Q96KH6 178 aa18.43■□□□□ 0.54
TRIM47-207ENST00000593089 MED18Q9BUE0 208 aa18.43■□□□□ 0.54
TRIM47-207ENST00000593089 C12orf65Q9H3J6 166 aaKnown RBP18.43■□□□□ 0.54
TRIM47-207ENST00000593089 RNF122Q9H9V4 155 aa18.43■□□□□ 0.54
TRIM47-207ENST00000593089 ZNF226Q9NYT6 803 aa18.43■□□□□ 0.54
TRIM47-207ENST00000593089 ZNF175Q9Y473 711 aa18.43■□□□□ 0.54
TRIM47-207ENST00000593089 PTGDR2Q9Y5Y4 395 aa18.43■□□□□ 0.54
TRIM47-207ENST00000593089 DEFB108AA8MXU0 73 aa18.42■□□□□ 0.54
TRIM47-207ENST00000593089 PDPK1O15530 556 aa18.42■□□□□ 0.54
TRIM47-207ENST00000593089 EMC8O43402 210 aa18.42■□□□□ 0.54
TRIM47-207ENST00000593089 PLIN3O60664 434 aa18.42■□□□□ 0.54
TRIM47-207ENST00000593089 KCNH1O95259 989 aa18.42■□□□□ 0.54
TRIM47-207ENST00000593089 IGKV1D-16P01601 117 aa18.42■□□□□ 0.54
TRIM47-207ENST00000593089 UROSP10746 265 aa18.42■□□□□ 0.54
TRIM47-207ENST00000593089 CCKARP32238 428 aa18.42■□□□□ 0.54
TRIM47-207ENST00000593089 GPC1P35052 558 aa18.42■□□□□ 0.54
TRIM47-207ENST00000593089 UGT2B10P36537 528 aa18.42■□□□□ 0.54
TRIM47-207ENST00000593089 DNAJB13P59910 316 aa18.42■□□□□ 0.54
TRIM47-207ENST00000593089 RPS3AP61247 264 aaKnown RBP18.42■□□□□ 0.54
TRIM47-207ENST00000593089 C17orf67Q0P5P2 114 aa18.42■□□□□ 0.54
TRIM47-207ENST00000593089 SGCBQ16585 318 aa18.42■□□□□ 0.54
TRIM47-207ENST00000593089 CCDC153Q494R4 210 aa18.42■□□□□ 0.54
TRIM47-207ENST00000593089 PPP4R4Q6NUP7 873 aa18.42■□□□□ 0.54
TRIM47-207ENST00000593089 APOOLQ6UXV4 268 aa18.42■□□□□ 0.54
TRIM47-207ENST00000593089 SH2D5Q6ZV89 423 aa18.42■□□□□ 0.54
TRIM47-207ENST00000593089 Q71RC1 249 aaPredicted RBP18.42■□□□□ 0.54
TRIM47-207ENST00000593089 ZNF550Q7Z398 422 aa18.42■□□□□ 0.54
TRIM47-207ENST00000593089 GALNT10Q86SR1 603 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms