RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 HMX3A6NHT5 357 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 ZNF217O75362 1048 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 SOX14O95416 240 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 FHP07954 510 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 OR12D1P0DN82 309 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 IFNGR2P38484 337 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 SLC9A3P48764 834 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 WNT4P56705 351 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 IFITM2Q01629 132 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 TNFRSF17Q02223 184 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 DOC2BQ14184 412 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 SUZ12Q15022 739 aaKnown RBP13.34□□□□□ -0.27
RANBP3-229ENST00000592771 GPR19Q15760 415 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 TMEM44Q2T9K0 475 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 ZNF750Q32MQ0 723 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 PLK5Q496M5 336 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 SYT14P1Q58G82 188 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 PODNL1Q6PEZ8 512 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 RNF44Q7L0R7 432 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 DGLUCYQ7Z3D6 616 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 NRARPQ7Z6K4 114 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 LAPTM4BQ86VI4 370 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 SFTPA2Q8IWL1 248 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 CCDC116Q8IYX3 515 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 CAMKVQ8NCB2 501 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 OR56A1Q8NGH5 318 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 FGF11Q92914 225 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 KLHDC7BQ96G42 594 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 KCTD7Q96MP8 289 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 COQ7Q99807 217 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 ZFYVE21Q9BQ24 234 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 MIR1-1HGQ9H1L0 117 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 SNTG1Q9NSN8 517 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 GIMAP4Q9NUV9 329 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 TXNL4BQ9NX01 149 aaKnown RBP13.34□□□□□ -0.27
RANBP3-229ENST00000592771 TVP23BQ9NYZ1 205 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 PHF11Q9UIL8 331 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 EXOSC1Q9Y3B2 195 aaKnown RBP13.34□□□□□ -0.27
RANBP3-229ENST00000592771 KNL1Q8NG31 2342 aa13.34□□□□□ -0.27
RANBP3-229ENST00000592771 A0A0J9YY10 115 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 A0A1W2PS29 197 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 URADA6NGE7 173 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 TLX2O43763 284 aaPredicted RBP13.33□□□□□ -0.28
RANBP3-229ENST00000592771 IDH3BO43837 385 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 NR2F1P10589 423 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 ACP2P11117 423 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 IL7P13232 177 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 PTBP1P26599 531 aaKnown RBP eCLIP13.33□□□□□ -0.284e-10■□□□□ 11
RANBP3-229ENST00000592771 FEN1P39748 380 aaKnown RBP13.33□□□□□ -0.28
RANBP3-229ENST00000592771 BLKP51451 505 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 TPBGQ13641 420 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 GINS1Q14691 196 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 SF3B4Q15427 424 aaKnown RBP eCLIP13.33□□□□□ -0.281e-7■■■■□ 26.1
RANBP3-229ENST00000592771 ZNF79Q15937 498 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 CARTPTQ16568 116 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 ZNF542PQ5EBM4 170 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 TAF8Q7Z7C8 310 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 PARGQ86W56 976 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 OR4K5Q8NGD3 323 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 OR4D11Q8NGI4 311 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 VANGL1Q8TAA9 524 aaPredicted RBP13.33□□□□□ -0.28
RANBP3-229ENST00000592771 CAPSLQ8WWF8 208 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 ZNF582Q96NG8 517 aaPredicted RBP13.33□□□□□ -0.28
RANBP3-229ENST00000592771 NELL2Q99435 816 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 MUTYHQ9UIF7 546 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 TDRD6O60522 2096 aaKnown RBP13.33□□□□□ -0.28
RANBP3-229ENST00000592771 A0A0G2JPF8 293 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 CENPBD1B2RD01 187 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 HNRNPCL2B2RXH8 293 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 HNRNPCL3B7ZW38 293 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 SYT5O00445 386 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 PRODHO43272 600 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 EMC8O43402 210 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 HNRNPCL4P0DMR1 293 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 TNNI3P19429 210 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 MMP11P24347 488 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 FGF9P31371 208 aaPredicted RBP13.33□□□□□ -0.28
RANBP3-229ENST00000592771 MPIP34949 423 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 RFX2P48378 723 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 FUT5Q11128 374 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 SYPL1Q16563 259 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 DDI2Q5TDH0 399 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 PTCRAQ6ISU1 281 aaPredicted RBP13.33□□□□□ -0.28
RANBP3-229ENST00000592771 ZER1Q7Z7L7 766 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 FAM160A2Q8N612 972 aaPredicted RBP13.33□□□□□ -0.28
RANBP3-229ENST00000592771 MORN4Q8NDC4 146 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 OR5D16Q8NGK9 328 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 MAFAQ8NHW3 353 aaPredicted RBP13.33□□□□□ -0.28
RANBP3-229ENST00000592771 ELP4Q96EB1 424 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 LRRC61Q9BV99 259 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 PINK1Q9BXM7 581 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 TP63Q9H3D4 680 aaPredicted RBP13.33□□□□□ -0.28
RANBP3-229ENST00000592771 ANKRD19PQ9H560 264 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 PRDM6Q9NQX0 595 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 NTMQ9P121 344 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 CA14Q9ULX7 337 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 GSTK1Q9Y2Q3 226 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 N6AMT1Q9Y5N5 214 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 COL6A3P12111 3177 aa13.33□□□□□ -0.28
RANBP3-229ENST00000592771 LOC105369274A0A096LPK9 316 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms