RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 GCNT2Q8N0V5 402 aa17.04■□□□□ 0.32
CCDC43-205ENST00000592333 HOXB13Q92826 284 aaPredicted RBP17.04■□□□□ 0.32
CCDC43-205ENST00000592333 STARD4Q96DR4 205 aa17.04■□□□□ 0.32
CCDC43-205ENST00000592333 POM121Q96HA1 1249 aa17.04■□□□□ 0.32
CCDC43-205ENST00000592333 DSN1Q9H410 356 aa17.04■□□□□ 0.32
CCDC43-205ENST00000592333 NEUROD4Q9HD90 331 aa17.04■□□□□ 0.32
CCDC43-205ENST00000592333 RPH3AQ9Y2J0 694 aaPredicted RBP17.04■□□□□ 0.32
CCDC43-205ENST00000592333 TESMINQ9Y4I5 508 aa17.04■□□□□ 0.32
CCDC43-205ENST00000592333 AP4B1Q9Y6B7 739 aa17.04■□□□□ 0.32
CCDC43-205ENST00000592333 ZNF469Q96JG9 3925 aaPredicted RBP17.04■□□□□ 0.32
CCDC43-205ENST00000592333 MED12LQ86YW9 2145 aa17.03■□□□□ 0.32
CCDC43-205ENST00000592333 B4DXG7 233 aa17.03■□□□□ 0.32
CCDC43-205ENST00000592333 SLC28A1O00337 649 aa17.03■□□□□ 0.32
CCDC43-205ENST00000592333 EMC8O43402 210 aa17.03■□□□□ 0.32
CCDC43-205ENST00000592333 KCNH1O95259 989 aa17.03■□□□□ 0.32
CCDC43-205ENST00000592333 PROCP04070 461 aa17.03■□□□□ 0.32
CCDC43-205ENST00000592333 CD8BP10966 210 aa17.03■□□□□ 0.32
CCDC43-205ENST00000592333 HK1P19367 917 aa17.03■□□□□ 0.32
CCDC43-205ENST00000592333 LCN1P31025 176 aa17.03■□□□□ 0.32
CCDC43-205ENST00000592333 HOXC12P31275 282 aa17.03■□□□□ 0.32
CCDC43-205ENST00000592333 PRR5P85299 388 aa17.03■□□□□ 0.32
CCDC43-205ENST00000592333 KIAA0040Q15053 153 aa17.03■□□□□ 0.32
CCDC43-205ENST00000592333 TDRPQ86YL5 185 aa17.03■□□□□ 0.32
CCDC43-205ENST00000592333 SLC39A3Q9BRY0 314 aa17.03■□□□□ 0.32
CCDC43-205ENST00000592333 OXSMQ9NWU1 459 aa17.03■□□□□ 0.32
CCDC43-205ENST00000592333 ZNF226Q9NYT6 803 aa17.03■□□□□ 0.32
CCDC43-205ENST00000592333 TBK1Q9UHD2 729 aa17.03■□□□□ 0.32
CCDC43-205ENST00000592333 MID2Q9UJV3 735 aa17.03■□□□□ 0.32
CCDC43-205ENST00000592333 CCL27Q9Y4X3 112 aa17.03■□□□□ 0.32
CCDC43-205ENST00000592333 SCO2O43819 266 aa17.02■□□□□ 0.32
CCDC43-205ENST00000592333 PLIN3O60664 434 aa17.02■□□□□ 0.32
CCDC43-205ENST00000592333 NGFRP08138 427 aa17.02■□□□□ 0.32
CCDC43-205ENST00000592333 FCGR2AP12318 317 aa17.02■□□□□ 0.32
CCDC43-205ENST00000592333 CD79BP40259 229 aa17.02■□□□□ 0.32
CCDC43-205ENST00000592333 RPS3AP61247 264 aaKnown RBP17.02■□□□□ 0.32
CCDC43-205ENST00000592333 SH2D4BQ5SQS7 431 aa17.02■□□□□ 0.32
CCDC43-205ENST00000592333 RAET1LQ5VY80 246 aa17.02■□□□□ 0.32
CCDC43-205ENST00000592333 SHEQ5VZ18 495 aa17.02■□□□□ 0.32
CCDC43-205ENST00000592333 FAM219BQ5XKK7 198 aa17.02■□□□□ 0.32
CCDC43-205ENST00000592333 METTL25Q8N6Q8 603 aa17.02■□□□□ 0.32
CCDC43-205ENST00000592333 CEP70Q8NHQ1 597 aa17.02■□□□□ 0.32
CCDC43-205ENST00000592333 DUSP19Q8WTR2 217 aa17.02■□□□□ 0.32
CCDC43-205ENST00000592333 C1GALT1C1Q96EU7 318 aa17.02■□□□□ 0.32
CCDC43-205ENST00000592333 PIP5K1AQ99755 562 aa17.02■□□□□ 0.32
CCDC43-205ENST00000592333 TRMOQ9BU70 441 aa17.02■□□□□ 0.32
CCDC43-205ENST00000592333 RNF122Q9H9V4 155 aa17.02■□□□□ 0.32
CCDC43-205ENST00000592333 PAQR5Q9NXK6 330 aaPredicted RBP17.02■□□□□ 0.32
CCDC43-205ENST00000592333 NTMQ9P121 344 aa17.02■□□□□ 0.32
CCDC43-205ENST00000592333 ZNF337Q9Y3M9 751 aa17.02■□□□□ 0.32
CCDC43-205ENST00000592333 A0A1W2PPM1 405 aa17.01■□□□□ 0.31
CCDC43-205ENST00000592333 CTIFO43310 598 aaKnown RBP17.01■□□□□ 0.31
CCDC43-205ENST00000592333 RGS14O43566 566 aa17.01■□□□□ 0.31
CCDC43-205ENST00000592333 SEC22BO75396 215 aa17.01■□□□□ 0.31
CCDC43-205ENST00000592333 NME6O75414 186 aaPredicted RBP17.01■□□□□ 0.31
CCDC43-205ENST00000592333 FAM153BP0C7A2 387 aa17.01■□□□□ 0.31
CCDC43-205ENST00000592333 PRPS2P11908 318 aa17.01■□□□□ 0.31
CCDC43-205ENST00000592333 CPA3P15088 417 aa17.01■□□□□ 0.31
CCDC43-205ENST00000592333 DDX5P17844 614 aaKnown RBP17.01■□□□□ 0.31
CCDC43-205ENST00000592333 CD53P19397 219 aa17.01■□□□□ 0.31
CCDC43-205ENST00000592333 MAP3K8P41279 467 aa17.01■□□□□ 0.31
CCDC43-205ENST00000592333 KIR2DL2P43627 348 aaPredicted RBP17.01■□□□□ 0.31
CCDC43-205ENST00000592333 PRSS53Q2L4Q9 553 aa17.01■□□□□ 0.31
CCDC43-205ENST00000592333 FAM153CQ494X1 144 aa17.01■□□□□ 0.31
CCDC43-205ENST00000592333 ZCCHC12Q6PEW1 402 aa17.01■□□□□ 0.31
CCDC43-205ENST00000592333 LRRC75A-AS1Q8N1F1 130 aa17.01■□□□□ 0.31
CCDC43-205ENST00000592333 CDRT4Q8N9R6 151 aa17.01■□□□□ 0.31
CCDC43-205ENST00000592333 ZFP28Q8NHY6 868 aa17.01■□□□□ 0.31
CCDC43-205ENST00000592333 CDC26Q8NHZ8 85 aa17.01■□□□□ 0.31
CCDC43-205ENST00000592333 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.01■□□□□ 0.31
CCDC43-205ENST00000592333 GFM2Q969S9 779 aaKnown RBP17.01■□□□□ 0.31
CCDC43-205ENST00000592333 ZBED6CLQ96FA7 236 aaPredicted RBP17.01■□□□□ 0.31
CCDC43-205ENST00000592333 PGM2Q96G03 612 aa17.01■□□□□ 0.31
CCDC43-205ENST00000592333 FCRL1Q96LA6 429 aa17.01■□□□□ 0.31
CCDC43-205ENST00000592333 CCT7Q99832 543 aa17.01■□□□□ 0.31
CCDC43-205ENST00000592333 TBL1XR1Q9BZK7 514 aa17.01■□□□□ 0.31
CCDC43-205ENST00000592333 C1orf109Q9NX04 203 aa17.01■□□□□ 0.31
CCDC43-205ENST00000592333 MED11Q9P086 117 aa17.01■□□□□ 0.31
CCDC43-205ENST00000592333 TMED5Q9Y3A6 229 aa17.01■□□□□ 0.31
CCDC43-205ENST00000592333 POLR3HQ9Y535 204 aaPredicted RBP17.01■□□□□ 0.31
CCDC43-205ENST00000592333 ACANP16112 2415 aa17.01■□□□□ 0.31
CCDC43-205ENST00000592333 FLNAP21333 2647 aaKnown RBP17■□□□□ 0.31
CCDC43-205ENST00000592333 A0A087WZY1 265 aa17■□□□□ 0.31
CCDC43-205ENST00000592333 OR2M5A3KFT3 312 aa17■□□□□ 0.31
CCDC43-205ENST00000592333 NKX2-2O95096 273 aa17■□□□□ 0.31
CCDC43-205ENST00000592333 HSPA4LO95757 839 aa17■□□□□ 0.31
CCDC43-205ENST00000592333 NEFHP12036 1026 aa17■□□□□ 0.31
CCDC43-205ENST00000592333 ZNF17P17021 662 aa17■□□□□ 0.31
CCDC43-205ENST00000592333 FRKP42685 505 aaPredicted RBP17■□□□□ 0.31
CCDC43-205ENST00000592333 CLDN15P56746 228 aa17■□□□□ 0.31
CCDC43-205ENST00000592333 TMEM44Q2T9K0 475 aa17■□□□□ 0.31
CCDC43-205ENST00000592333 LIPMQ5VYY2 423 aa17■□□□□ 0.31
CCDC43-205ENST00000592333 BIVMQ86UB2 503 aa17■□□□□ 0.31
CCDC43-205ENST00000592333 CAVIN3Q969G5 261 aa17■□□□□ 0.31
CCDC43-205ENST00000592333 PIGTQ969N2 578 aa17■□□□□ 0.31
CCDC43-205ENST00000592333 MTERF3Q96E29 417 aa17■□□□□ 0.31
CCDC43-205ENST00000592333 ACSS1Q9NUB1 689 aaPredicted RBP17■□□□□ 0.31
CCDC43-205ENST00000592333 ALG1L2C9J202 215 aa16.99■□□□□ 0.31
CCDC43-205ENST00000592333 ARHGEF9O43307 516 aa16.99■□□□□ 0.31
CCDC43-205ENST00000592333 SMNDC1O75940 238 aaKnown RBP eCLIP16.99■□□□□ 0.31
CCDC43-205ENST00000592333 UTS2O95399 124 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms