RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 SLMAPQ14BN4 828 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 OR1C1Q15619 314 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 PDK4Q16654 411 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 XKR6Q5GH73 641 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 GFRALQ6UXV0 394 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 ZNF793Q6ZN11 406 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 FJX1Q86VR8 437 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 RPS19BP1Q86WX3 136 aaKnown RBP6.94□□□□□ -1.3
VMP1-213ENST00000591877 RNF175Q8N4F7 328 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 SNX31Q8N9S9 440 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 APCDD1LQ8NCL9 501 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 TTLQ8NG68 377 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 OR2L5Q8NG80 312 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 ZNF473Q8WTR7 871 aaKnown RBP6.94□□□□□ -1.3
VMP1-213ENST00000591877 KCTD4Q8WVF5 259 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 NPIPB3Q92617 1050 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 EXT2Q93063 718 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 NXNL1Q96CM4 212 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 ERP27Q96DN0 273 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 PTCD3Q96EY7 689 aaKnown RBP6.94□□□□□ -1.3
VMP1-213ENST00000591877 WDYHV1Q96HA8 205 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 F2RL3Q96RI0 385 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 CSF3RQ99062 836 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 UTP23Q9BRU9 249 aaKnown RBP6.94□□□□□ -1.3
VMP1-213ENST00000591877 FUZQ9BT04 418 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 ALG8Q9BVK2 526 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 NPLQ9BXD5 320 aaPredicted RBP6.94□□□□□ -1.3
VMP1-213ENST00000591877 CAPS2Q9BXY5 557 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 TRIM45Q9H8W5 580 aaPredicted RBP6.94□□□□□ -1.3
VMP1-213ENST00000591877 PLEKHA2Q9HB19 425 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 KLHL1Q9NR64 748 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 PPIEQ9UNP9 301 aaKnown RBP6.94□□□□□ -1.3
VMP1-213ENST00000591877 MMACHCQ9Y4U1 282 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 NOTCH2Q04721 2471 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 ANKDD1BA6NHY2 528 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 TMEM200CA6NKL6 621 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 UBXN8O00124 270 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 PSMD12O00232 456 aaPredicted RBP6.93□□□□□ -1.3
VMP1-213ENST00000591877 RTCAO00442 366 aaKnown RBP6.93□□□□□ -1.3
VMP1-213ENST00000591877 DYNC1I1O14576 645 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 ZNHIT1O43257 154 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 PRKNO60260 465 aaPredicted RBP6.93□□□□□ -1.3
VMP1-213ENST00000591877 KERAO60938 352 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 NCR1O76036 304 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 URI1O94763 535 aaPredicted RBP6.93□□□□□ -1.3
VMP1-213ENST00000591877 SLU7O95391 586 aaKnown RBP6.93□□□□□ -1.3
VMP1-213ENST00000591877 CRYABP02511 175 aaKnown RBP6.93□□□□□ -1.3
VMP1-213ENST00000591877 C2P06681 752 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 SP1P08047 785 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 GSTM2P28161 218 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 STX2P32856 288 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 LIPAP38571 399 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 MTTPP55157 894 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 LIM2P55344 173 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 HSD17B7P56937 341 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 MLF1P58340 268 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 IRF8Q02556 426 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 NAB1Q13506 487 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 TBCCQ15814 346 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 SLC25A25Q6KCM7 469 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 C8orf74Q6P047 294 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 RAPH1Q70E73 1250 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 GALNTL5Q7Z4T8 443 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 SIAH3Q8IW03 269 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 CHERPQ8IWX8 916 aaKnown RBP6.93□□□□□ -1.3
VMP1-213ENST00000591877 LAS2Q8IYD9 372 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 SLC5A8Q8N695 610 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 FAM47BQ8NA70 645 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 STAG3L4Q8TBR4 150 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 UBTD2Q8WUN7 234 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 GPR78Q96P69 363 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 SERINC2Q96SA4 455 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 EFCAB11Q9BUY7 163 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 MS4A8Q9BY19 250 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 CNOT10Q9H9A5 744 aaKnown RBP6.93□□□□□ -1.3
VMP1-213ENST00000591877 PRTFDC1Q9NRG1 225 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 PNO1Q9NRX1 252 aaKnown RBP6.93□□□□□ -1.3
VMP1-213ENST00000591877 NINJ2Q9NZG7 142 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 NUDT4Q9NZJ9 180 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 DKK2Q9UBU2 259 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 SEC14L3Q9UDX4 400 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 HSF4Q9ULV5 492 aa6.93□□□□□ -1.3
VMP1-213ENST00000591877 APCP25054 2843 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 TRBV11-1A0A0K0K1C0 115 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 A0A1B0GUH1 482 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 SUPT3HB4E1H0 165 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 K7EPI3 171 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 KLK8O60259 260 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 NME2P1O60361 137 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 SH3BGRLO75368 114 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 SUPT3HO75486 399 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 MYO1DO94832 1006 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 SCGB1D1O95968 90 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 ALDOAP04075 364 aaKnown RBP6.92□□□□□ -1.3
VMP1-213ENST00000591877 ABCD3P28288 659 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 CRABP2P29373 138 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 EEF1DP29692 281 aaKnown RBP6.92□□□□□ -1.3
VMP1-213ENST00000591877 MSH2P43246 934 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 PCP4P48539 62 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 CLCN2P51788 898 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms