RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, human

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-222	ENST00000590619		M0R1B8	84 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	TNFSF11	O14788	317 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	TAPBP	O15533	448 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	LIAS	O43766	372 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	TMPRSS11D	O60235	418 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	NME6	O75414	186 aa	Predicted RBP	5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	YES1	P07947	543 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	MSMB	P08118	114 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	DAO	P14920	347 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	GGT1	P19440	569 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	MDK	P21741	143 aa	Predicted RBP	5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	MAGEA1	P43355	309 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	EMD	P50402	254 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	UBASH3A	P57075	661 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	CARD18	P57730	90 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	CHRNE	Q04844	493 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	GANAB	Q14697	944 aa	Known RBP	5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	MORF4L2	Q15014	288 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	ACAP2	Q15057	778 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	KCTD19	Q17RG1	926 aa	Predicted RBP	5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	TUSC1	Q2TAM9	212 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	PRICKLE4	Q2TBC4	344 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	TRMT12	Q53H54	448 aa	Known RBP	5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	LGSN	Q5TDP6	509 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	KHDRBS2	Q5VWX1	349 aa	Known RBP	5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	ANKRD22	Q5VYY1	191 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	KLHL17	Q6TDP4	642 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	SSX8	Q7RTT4	187 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	TDRP	Q86YL5	185 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	RELL1	Q8IUW5	271 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	WDR75	Q8IWA0	830 aa	Known RBP	5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	ZCCHC24	Q8N2G6	241 aa	Known RBP	5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	RNF175	Q8N4F7	328 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	RNF10	Q8N5U6	811 aa	Known RBP	5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	ZNF433	Q8N7K0	673 aa	Predicted RBP	5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	CEP112	Q8N8E3	955 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	SYT14	Q8NB59	555 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	OR4K14	Q8NGD5	310 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	OR52N5	Q8NH56	324 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	OR2V1	Q8NHB1	315 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	UHMK1	Q8TAS1	419 aa	Known RBP	5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	ESAM	Q96AP7	390 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	RGMA	Q96B86	450 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	C1GALT1C1	Q96EU7	318 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	PTCD3	Q96EY7	689 aa	Known RBP	5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	PDLIM5	Q96HC4	596 aa	Known RBP	5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	C1orf147	Q96MC9	270 aa	Predicted RBP	5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	DNAJC7	Q99615	494 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	RBM4B	Q9BQ04	359 aa	Known RBP	5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	BPIFA3	Q9BQP9	254 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	LRRC1	Q9BTT6	524 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	ZNF717	Q9BY31	904 aa	Predicted RBP	5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	TSGA10	Q9BZW7	698 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	BRINP2	Q9C0B6	783 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	EHD1	Q9H4M9	534 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	G6PC2	Q9NQR9	355 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	PAK5	Q9P286	719 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	CFL2	Q9Y281	166 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	PLLP	Q9Y342	182 aa		5.63	□□□□□ -1.51
DNMT1-222	ENST00000590619	HEATR1	Q9H583	2144 aa	Known RBP	5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619		A0A0A6YYD5	115 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	MAGEB16	A2A368	324 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619		C9JVG2	144 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	LYNX1	G3V0Z9	82 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	PLPP1	O14494	284 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	WNT9B	O14905	357 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	CLGN	O14967	610 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	SCAMP2	O15127	329 aa	Known RBP	5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	NDUFB5	O43674	189 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	SCO2	O43819	266 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	FADS1	O60427	444 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	PRKD3	O94806	890 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	CBX7	O95931	251 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	AHSG	P02765	367 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	PTMA	P06454	111 aa	Known RBP	5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	FAM58BP	P0C7Q3	252 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	CT45A8	P0DMV1	189 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	CT45A9	P0DMV2	189 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	LYNX1	P0DP58	116 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	CPM	P14384	443 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	IFNGR1	P15260	489 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	ADRA2C	P18825	462 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	PIK3R1	P27986	724 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	SERPINF1	P36955	418 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	OR3A2	P47893	321 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	KHK	P50053	298 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	HNMT	P50135	292 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	PNLIPRP2	P54317	469 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	RAC1	P63000	192 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	CDKL1	Q00532	357 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	SNX1	Q13596	522 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	EFR3A	Q14156	821 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	MLC1	Q15049	377 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	HIST2H2AC	Q16777	129 aa	Predicted RBP	5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	BEAN1	Q3B7T3	259 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	HSP90AA5P	Q58FG0	334 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	CT45A2	Q5DJT8	189 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	FBXO48	Q5FWF7	155 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	HBM	Q6B0K9	141 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	HIST2H2AA3	Q6FI13	130 aa		5.62	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms