RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 PEX1O43933 1283 aa17.97■□□□□ 0.47
CIRBP-220ENST00000588917 RASAL1O95294 804 aa17.97■□□□□ 0.47
CIRBP-220ENST00000588917 HPGDP15428 266 aa17.97■□□□□ 0.47
CIRBP-220ENST00000588917 MVDP53602 400 aa17.97■□□□□ 0.47
CIRBP-220ENST00000588917 CASP9P55211 416 aa17.97■□□□□ 0.47
CIRBP-220ENST00000588917 DSTNP60981 165 aa17.97■□□□□ 0.47
CIRBP-220ENST00000588917 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.97■□□□□ 0.47
CIRBP-220ENST00000588917 FIGNL1Q6PIW4 674 aa17.97■□□□□ 0.47
CIRBP-220ENST00000588917 GALNTL5Q7Z4T8 443 aa17.97■□□□□ 0.47
CIRBP-220ENST00000588917 PTRH1Q86Y79 214 aaKnown RBP17.97■□□□□ 0.47
CIRBP-220ENST00000588917 FITM2Q8N6M3 262 aa17.97■□□□□ 0.47
CIRBP-220ENST00000588917 METTL25Q8N6Q8 603 aa17.97■□□□□ 0.47
CIRBP-220ENST00000588917 POGLUT1Q8NBL1 392 aa17.97■□□□□ 0.47
CIRBP-220ENST00000588917 OR8J3Q8NGG0 315 aa17.97■□□□□ 0.47
CIRBP-220ENST00000588917 OIT3Q8WWZ8 545 aa17.97■□□□□ 0.47
CIRBP-220ENST00000588917 RCN3Q96D15 328 aa17.97■□□□□ 0.47
CIRBP-220ENST00000588917 OTUB1Q96FW1 271 aaPredicted RBP17.97■□□□□ 0.47
CIRBP-220ENST00000588917 AURKBQ96GD4 344 aaPredicted RBP17.97■□□□□ 0.47
CIRBP-220ENST00000588917 TRNT1Q96Q11 434 aaKnown RBP17.97■□□□□ 0.47
CIRBP-220ENST00000588917 SDF2Q99470 211 aa17.97■□□□□ 0.47
CIRBP-220ENST00000588917 FAM173AQ9BQD7 235 aa17.97■□□□□ 0.47
CIRBP-220ENST00000588917 ANGPTL4Q9BY76 406 aa17.97■□□□□ 0.47
CIRBP-220ENST00000588917 METTL7AQ9H8H3 244 aa17.97■□□□□ 0.47
CIRBP-220ENST00000588917 SDHAF3Q9NRP4 125 aa17.97■□□□□ 0.47
CIRBP-220ENST00000588917 UBQLN4Q9NRR5 601 aa17.97■□□□□ 0.47
CIRBP-220ENST00000588917 P2RX2Q9UBL9 471 aa17.97■□□□□ 0.47
CIRBP-220ENST00000588917 TAGLN3Q9UI15 199 aa17.97■□□□□ 0.47
CIRBP-220ENST00000588917 ABCG2Q9UNQ0 655 aa17.97■□□□□ 0.47
CIRBP-220ENST00000588917 UBR5O95071 2799 aaPredicted RBP17.96■□□□□ 0.47
CIRBP-220ENST00000588917 C15orf38-AP3S2A0A0A6YYH1 394 aa17.96■□□□□ 0.47
CIRBP-220ENST00000588917 NGFRP08138 427 aa17.96■□□□□ 0.47
CIRBP-220ENST00000588917 CCL3P10147 92 aa17.96■□□□□ 0.47
CIRBP-220ENST00000588917 BMP2P12643 396 aa17.96■□□□□ 0.47
CIRBP-220ENST00000588917 CYP4B1P13584 511 aa17.96■□□□□ 0.47
CIRBP-220ENST00000588917 ETFAP13804 333 aa17.96■□□□□ 0.47
CIRBP-220ENST00000588917 CASP3P42574 277 aa17.96■□□□□ 0.47
CIRBP-220ENST00000588917 HPCAP84074 193 aa17.96■□□□□ 0.47
CIRBP-220ENST00000588917 COX20Q5RI15 118 aa17.96■□□□□ 0.47
CIRBP-220ENST00000588917 NANOGP8Q6NSW7 305 aa17.96■□□□□ 0.47
CIRBP-220ENST00000588917 HACD2Q6Y1H2 254 aa17.96■□□□□ 0.47
CIRBP-220ENST00000588917 ARPINQ7Z6K5 226 aa17.96■□□□□ 0.47
CIRBP-220ENST00000588917 PACS2Q86VP3 889 aa17.96■□□□□ 0.47
CIRBP-220ENST00000588917 SULF2Q8IWU5 870 aa17.96■□□□□ 0.47
CIRBP-220ENST00000588917 ZNF527Q8NB42 609 aa17.96■□□□□ 0.47
CIRBP-220ENST00000588917 RAB8BQ92930 207 aa17.96■□□□□ 0.47
CIRBP-220ENST00000588917 NANOGQ9H9S0 305 aa17.96■□□□□ 0.47
CIRBP-220ENST00000588917 CNOT11Q9UKZ1 510 aaKnown RBP17.96■□□□□ 0.47
CIRBP-220ENST00000588917 KCNE3Q9Y6H6 103 aa17.96■□□□□ 0.47
CIRBP-220ENST00000588917 UTS2O95399 124 aa17.95■□□□□ 0.46
CIRBP-220ENST00000588917 CRYABP02511 175 aaKnown RBP17.95■□□□□ 0.46
CIRBP-220ENST00000588917 NR2F1P10589 423 aa17.95■□□□□ 0.46
CIRBP-220ENST00000588917 ENDOUP21128 410 aaKnown RBP17.95■□□□□ 0.46
CIRBP-220ENST00000588917 TBXA2RP21731 343 aa17.95■□□□□ 0.46
CIRBP-220ENST00000588917 KCNJ2P63252 427 aa17.95■□□□□ 0.46
CIRBP-220ENST00000588917 GPAT3Q53EU6 434 aa17.95■□□□□ 0.46
CIRBP-220ENST00000588917 DTNBP1Q96EV8 351 aa17.95■□□□□ 0.46
CIRBP-220ENST00000588917 NODALQ96S42 347 aa17.95■□□□□ 0.46
CIRBP-220ENST00000588917 CPPED1Q9BRF8 314 aaPredicted RBP17.95■□□□□ 0.46
CIRBP-220ENST00000588917 DOHHQ9BU89 302 aa17.95■□□□□ 0.46
CIRBP-220ENST00000588917 MTHFD2LQ9H903 347 aaPredicted RBP17.95■□□□□ 0.46
CIRBP-220ENST00000588917 KLRF1Q9NZS2 232 aa17.95■□□□□ 0.46
CIRBP-220ENST00000588917 PCDHGA10Q9Y5H3 936 aa17.95■□□□□ 0.46
CIRBP-220ENST00000588917 PRAMEF25A6NGN4 478 aa17.94■□□□□ 0.46
CIRBP-220ENST00000588917 SCDO00767 359 aa17.94■□□□□ 0.46
CIRBP-220ENST00000588917 ICOSLGO75144 302 aa17.94■□□□□ 0.46
CIRBP-220ENST00000588917 IGKV1D-16P01601 117 aa17.94■□□□□ 0.46
CIRBP-220ENST00000588917 TFPTP0C1Z6 253 aa17.94■□□□□ 0.46
CIRBP-220ENST00000588917 ESRRAP11474 423 aaPredicted RBP17.94■□□□□ 0.46
CIRBP-220ENST00000588917 CRISP3P54108 245 aa17.94■□□□□ 0.46
CIRBP-220ENST00000588917 ATP12AP54707 1039 aa17.94■□□□□ 0.46
CIRBP-220ENST00000588917 FLYWCH1Q4VC44 716 aa17.94■□□□□ 0.46
CIRBP-220ENST00000588917 CCNJQ5T5M9 372 aa17.94■□□□□ 0.46
CIRBP-220ENST00000588917 LRRC74BQ6ZQY2 392 aa17.94■□□□□ 0.46
CIRBP-220ENST00000588917 TRPM8Q7Z2W7 1104 aa17.94■□□□□ 0.46
CIRBP-220ENST00000588917 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.94■□□□□ 0.46
CIRBP-220ENST00000588917 OR2M7Q8NG81 312 aa17.94■□□□□ 0.46
CIRBP-220ENST00000588917 NSL1Q96IY1 281 aa17.94■□□□□ 0.46
CIRBP-220ENST00000588917 ECSITQ9BQ95 431 aa17.94■□□□□ 0.46
CIRBP-220ENST00000588917 SPATA9Q9BWV2 254 aa17.94■□□□□ 0.46
CIRBP-220ENST00000588917 HES7Q9BYE0 225 aa17.94■□□□□ 0.46
CIRBP-220ENST00000588917 TBL1XR1Q9BZK7 514 aa17.94■□□□□ 0.46
CIRBP-220ENST00000588917 SAP130Q9H0E3 1048 aa17.94■□□□□ 0.46
CIRBP-220ENST00000588917 TMEM38AQ9H6F2 299 aa17.94■□□□□ 0.46
CIRBP-220ENST00000588917 A4GALTQ9NPC4 353 aa17.94■□□□□ 0.46
CIRBP-220ENST00000588917 NDE1Q9NXR1 346 aa17.94■□□□□ 0.46
CIRBP-220ENST00000588917 BOKQ9UMX3 212 aaPredicted RBP17.94■□□□□ 0.46
CIRBP-220ENST00000588917 WDR45Q9Y484 360 aa17.94■□□□□ 0.46
CIRBP-220ENST00000588917 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.94■□□□□ 0.46
CIRBP-220ENST00000588917 A0A0G2JPF8 293 aa17.93■□□□□ 0.46
CIRBP-220ENST00000588917 HNRNPCL2B2RXH8 293 aa17.93■□□□□ 0.46
CIRBP-220ENST00000588917 HNRNPCL3B7ZW38 293 aa17.93■□□□□ 0.46
CIRBP-220ENST00000588917 C5orf58C9J3I9 102 aa17.93■□□□□ 0.46
CIRBP-220ENST00000588917 H3BNH8 94 aa17.93■□□□□ 0.46
CIRBP-220ENST00000588917 FADS1O60427 444 aa17.93■□□□□ 0.46
CIRBP-220ENST00000588917 HNRNPCL1O60812 293 aaKnown RBP17.93■□□□□ 0.46
CIRBP-220ENST00000588917 TNFRSF21O75509 655 aa17.93■□□□□ 0.46
CIRBP-220ENST00000588917 C1QCP02747 245 aa17.93■□□□□ 0.46
CIRBP-220ENST00000588917 HNRNPCL4P0DMR1 293 aa17.93■□□□□ 0.46
CIRBP-220ENST00000588917 EVI2BP34910 448 aa17.93■□□□□ 0.46
CIRBP-220ENST00000588917 MEOX1P50221 254 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms