RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 PLEKHM3Q6ZWE6 761 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 TSPYL5Q86VY4 417 aaPredicted RBP8.15□□□□□ -1.1
SMAD4-206ENST00000588860 KMT5CQ86Y97 462 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 CCDC71Q8IV32 467 aaPredicted RBP8.15□□□□□ -1.1
SMAD4-206ENST00000588860 C1orf210Q8IVY1 113 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 GPR135Q8IZ08 494 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 MAML2Q8IZL2 1156 aaPredicted RBP8.15□□□□□ -1.1
SMAD4-206ENST00000588860 PARP8Q8N3A8 854 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 OR4C6Q8NH72 309 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 FAM81AQ8TBF8 368 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.15□□□□□ -1.1
SMAD4-206ENST00000588860 NR4A3Q92570 626 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 SGCDQ92629 289 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 ZNF566Q969W8 418 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 CTHRC1Q96CG8 243 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 ZG16BQ96DA0 208 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 DGCR14Q96DF8 476 aaKnown RBP8.15□□□□□ -1.1
SMAD4-206ENST00000588860 RBM18Q96H35 190 aaKnown RBP8.15□□□□□ -1.1
SMAD4-206ENST00000588860 SLC41A2Q96JW4 573 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 HRASLS5Q96KN8 279 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 TSC22D3Q99576 134 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 NUDT22Q9BRQ3 303 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 PELOQ9BRX2 385 aaKnown RBP8.15□□□□□ -1.1
SMAD4-206ENST00000588860 NDC1Q9BTX1 674 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 CNPPD1Q9BV87 410 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 DUSP23Q9BVJ7 150 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 ZNF350Q9GZX5 532 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 RBM38Q9H0Z9 239 aaKnown RBP8.15□□□□□ -1.1
SMAD4-206ENST00000588860 SYNDIG1Q9H7V2 258 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 POLR1BQ9H9Y6 1135 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 FANCEQ9HB96 536 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 VCX3AQ9NNX9 186 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 RASSF1Q9NS23 344 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 GMEB2Q9UKD1 530 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 ATXN7L1Q9ULK2 861 aaPredicted RBP8.15□□□□□ -1.1
SMAD4-206ENST00000588860 SATB2Q9UPW6 733 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 RNF6Q9Y252 685 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 IFT52Q9Y366 437 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 TMEM184BQ9Y519 407 aaPredicted RBP8.15□□□□□ -1.1
SMAD4-206ENST00000588860 HEMK1Q9Y5R4 338 aaPredicted RBP8.15□□□□□ -1.1
SMAD4-206ENST00000588860 SNX5Q9Y5X3 404 aa8.15□□□□□ -1.1
SMAD4-206ENST00000588860 ASCC3Q8N3C0 2202 aaKnown RBP8.15□□□□□ -1.1
SMAD4-206ENST00000588860 MPDZO75970 2070 aa8.15□□□□□ -1.11
SMAD4-206ENST00000588860 HEATR5AQ86XA9 2040 aa8.15□□□□□ -1.11
SMAD4-206ENST00000588860 NPIPA5A0A0B4J1W7 369 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 LY6G6EA0A0G2JKS1 128 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 CENPVL1A0A0U1RR11 272 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 A0A1W2PRQ8 180 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 OR2W5A6NFC9 320 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 AGAP5A6NIR3 686 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 PTGES3LE9PB15 166 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 NPIPA7E9PJI5 369 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 H3BMH7 237 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 HRKO00198 91 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 AP3D1O14617 1153 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 DSCR3O14972 297 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 YKT6O15498 198 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 SIGLEC6O43699 453 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 XPNPEP2O43895 674 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 PRAMEF2O60811 474 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 NKX2-2O95096 273 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 THBS1P07996 1170 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 CCDC159P0C7I6 412 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 NPIPA8P0DM63 369 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 FOLR1P15328 257 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 PNLIPP16233 465 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 TNNI3P19429 210 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 S1PR1P21453 382 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 SDHBP21912 280 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 FBLP22087 321 aaKnown RBP8.14□□□□□ -1.11
SMAD4-206ENST00000588860 RPS4Y1P22090 263 aaKnown RBP8.14□□□□□ -1.11
SMAD4-206ENST00000588860 PAX7P23759 505 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 POU1F1P28069 291 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 KRT20P35900 424 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 MAP3K8P41279 467 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 RFX3P48380 749 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 RNF144AP50876 292 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-206ENST00000588860 PGDP52209 483 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 EEF1A1P68104 462 aaKnown RBP8.14□□□□□ -1.11
SMAD4-206ENST00000588860 HOXC5Q00444 222 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 PIGFQ07326 219 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 DGCR6Q14129 220 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 SERTAD2Q14140 314 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 TRAM2Q15035 370 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 ZBED5Q49AG3 693 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 PERM1Q5SV97 790 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 LAIR1Q6GTX8 287 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 PGBD2Q6P3X8 592 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 BORAQ6PGQ7 559 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 DEPDC4Q8N2C3 294 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 CLIP4Q8N3C7 705 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 LINC00471Q8N535 108 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 EID2Q8N6I1 236 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 ADAMTS16Q8TE57 1224 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 SAP25Q8TEE9 199 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 HOXB13Q92826 284 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-206ENST00000588860 CNDP2Q96KP4 475 aaKnown RBP8.14□□□□□ -1.11
SMAD4-206ENST00000588860 MCHR1Q99705 422 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 FUZQ9BT04 418 aa8.14□□□□□ -1.11
SMAD4-206ENST00000588860 LMF2Q9BU23 707 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms