RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 CHCHD6Q9BRQ6 235 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 CENPOQ9BU64 300 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 MND1Q9BWT6 205 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 NUAK2Q9H093 628 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 PDE7BQ9NP56 450 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 TEX10Q9NXF1 929 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 NPAP1Q9NZP6 1156 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 MRPS2Q9Y399 296 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 PCDHGB6Q9Y5F9 930 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 IRGMA1A4Y4 181 aa14□□□□□ -0.17
CDK5RAP3-236ENST00000584991 TBX1O43435 398 aa14□□□□□ -0.17
CDK5RAP3-236ENST00000584991 PSMA1P25786 263 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-236ENST00000584991 ELAVL4P26378 380 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-236ENST00000584991 TGFBR1P36897 503 aa14□□□□□ -0.17
CDK5RAP3-236ENST00000584991 SEPHS1P49903 392 aa14□□□□□ -0.17
CDK5RAP3-236ENST00000584991 LIM2P55344 173 aa14□□□□□ -0.17
CDK5RAP3-236ENST00000584991 GANABQ14697 944 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-236ENST00000584991 SUZ12Q15022 739 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-236ENST00000584991 MRM1Q6IN84 353 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-236ENST00000584991 TCTN3Q6NUS6 607 aa14□□□□□ -0.17
CDK5RAP3-236ENST00000584991 ABHD13Q7L211 337 aa14□□□□□ -0.17
CDK5RAP3-236ENST00000584991 HORMAD2Q8N7B1 307 aa14□□□□□ -0.17
CDK5RAP3-236ENST00000584991 HPS1Q92902 700 aa14□□□□□ -0.17
CDK5RAP3-236ENST00000584991 NUDT22Q9BRQ3 303 aa14□□□□□ -0.17
CDK5RAP3-236ENST00000584991 FUZQ9BT04 418 aa14□□□□□ -0.17
CDK5RAP3-236ENST00000584991 MOV10Q9HCE1 1003 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-236ENST00000584991 FBXW2Q9UKT8 454 aa14□□□□□ -0.17
CDK5RAP3-236ENST00000584991 ASB4Q9Y574 426 aa14□□□□□ -0.17
CDK5RAP3-236ENST00000584991 SNX8Q9Y5X2 465 aa14□□□□□ -0.17
CDK5RAP3-236ENST00000584991 A0A1W2PRQ8 180 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 LNP1A1A4G5 178 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 A8MU76 341 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 SPTBP11277 2137 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 POU2F1P14859 743 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 GABRA4P48169 554 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 CASP9P55211 416 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 DAB2P98082 770 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 DEFB134Q4QY38 66 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 MANEAQ5SRI9 462 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 PRAMEF8Q5VWM4 474 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 PRAMEF7Q5VXH5 474 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 WDR74Q6RFH5 385 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 FAM26EQ8N5C1 309 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 OR9Q1Q8NGQ5 310 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 WDR36Q8NI36 951 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 UCN3Q969E3 161 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 TMEM19Q96HH6 336 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 BCL2L10Q9HD36 194 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 P2RX2Q9UBL9 471 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 ATXN7L1Q9ULK2 861 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 LSM2Q9Y333 95 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 ATG4BQ9Y4P1 393 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 SLC35F4A4IF30 521 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 HMGN4O00479 90 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 SNPHO15079 494 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 SRPX2O60687 465 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 BCHEP06276 602 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 HSMCR30P0CW71 290 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 ALOX12P18054 663 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 PPP2R1BP30154 601 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 XKP51811 444 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 CCL7P80098 99 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 C1DQ13901 141 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 SPHARQ15513 63 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 TSTQ16762 297 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 NDUFAF5Q5TEU4 345 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 MFSD4BQ5TF39 518 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 FAM180BQ6P0A1 224 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 BHLHB9Q6PI77 547 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 SNX29P2Q8IUI4 249 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 CARFQ8N187 725 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 CYP4Z2PQ8N1L4 340 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 GPR32P1Q8NGA4 272 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 NAT6Q93015 286 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 TMCO6Q96DC7 493 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 SLC30A2Q9BRI3 323 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 POLDIP3Q9BY77 421 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 ROGDIQ9GZN7 287 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 CHRNA10Q9GZZ6 450 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 POLR2J3Q9H1A7 115 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 C5AR2Q9P296 337 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 PLCL2Q9UPR0 1127 aa13.99□□□□□ -0.17
CDK5RAP3-236ENST00000584991 TRBV4-1A0A0J9YWV2 114 aa13.98□□□□□ -0.17
CDK5RAP3-236ENST00000584991 A0A1W2PQM1 296 aa13.98□□□□□ -0.17
CDK5RAP3-236ENST00000584991 SNTNA6NMZ2 147 aa13.98□□□□□ -0.17
CDK5RAP3-236ENST00000584991 PRKRAO75569 313 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-236ENST00000584991 CKMT1AP12532 417 aa13.98□□□□□ -0.17
CDK5RAP3-236ENST00000584991 GSTM3P21266 225 aa13.98□□□□□ -0.17
CDK5RAP3-236ENST00000584991 CCT3P49368 545 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-236ENST00000584991 ARL4DP49703 201 aa13.98□□□□□ -0.17
CDK5RAP3-236ENST00000584991 MLLT11Q13015 90 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP3-236ENST00000584991 KCNAB1Q14722 419 aa13.98□□□□□ -0.17
CDK5RAP3-236ENST00000584991 TMEM64Q6YI46 380 aa13.98□□□□□ -0.17
CDK5RAP3-236ENST00000584991 PRSS41Q7RTY9 318 aa13.98□□□□□ -0.17
CDK5RAP3-236ENST00000584991 TMPRSS9Q7Z410 1059 aa13.98□□□□□ -0.17
CDK5RAP3-236ENST00000584991 AKAP14Q86UN6 197 aa13.98□□□□□ -0.17
CDK5RAP3-236ENST00000584991 NANOGP1Q8N7R0 232 aa13.98□□□□□ -0.17
CDK5RAP3-236ENST00000584991 IFI44Q8TCB0 444 aa13.98□□□□□ -0.17
CDK5RAP3-236ENST00000584991 MOAP1Q96BY2 351 aa13.98□□□□□ -0.17
CDK5RAP3-236ENST00000584991 WDFY2Q96P53 400 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms