RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 NXNL1Q96CM4 212 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 CDK15Q96Q40 435 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 ATOH8Q96SQ7 321 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 SERPINI1Q99574 410 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 LRRC1Q9BTT6 524 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 TMEM185BQ9H7F4 350 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 PTGES2Q9H7Z7 377 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 L2HGDHQ9H9P8 463 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 FAIMQ9NVQ4 179 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 VDAC3Q9Y277 283 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 TSC22D4Q9Y3Q8 395 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 OR10H1Q9Y4A9 318 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 AP4B1Q9Y6B7 739 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 C1orf226A1L170 272 aa12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 CXorf49A8MYA2 514 aaPredicted RBP12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 PGRMC1O00264 195 aaKnown RBP12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 TNFSF11O14788 317 aa12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 SEMA3DO95025 777 aa12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 CTAGE8P0CG41 777 aa12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 IL11P20809 199 aa12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 USF1P22415 310 aaPredicted RBP12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 FNTAP49354 379 aa12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 DSCR9P59020 149 aa12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 LSM11P83369 360 aaKnown RBP eCLIP12.56□□□□□ -0.43e-6■□□□□ 9.5
CSNK1D-224ENST00000584672 PDIA2Q13087 525 aaKnown RBP12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 GANABQ14697 944 aaKnown RBP12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 SGO1Q5FBB7 561 aa12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 SFRP5Q5T4F7 317 aa12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 FAM219BQ5XKK7 198 aa12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 DNAJC14Q6Y2X3 702 aaPredicted RBP12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 NUFIP2Q7Z417 695 aaKnown RBP12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 CMC1Q7Z7K0 106 aa12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 CTAGE4Q8IX94 777 aa12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 BANPQ8N9N5 519 aa12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 C10orf105Q8TEF2 133 aa12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 CNRIP1Q96F85 164 aaPredicted RBP12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 UBXN10Q96LJ8 280 aa12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 VSTM2LQ96N03 204 aa12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 NPAS1Q99742 590 aa12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 DDX47Q9H0S4 455 aaKnown RBP12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 NSMCE4AQ9NXX6 385 aa12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 SNX8Q9Y5X2 465 aa12.56□□□□□ -0.4
CSNK1D-224ENST00000584672 PLCE1Q9P212 2302 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 LINC01387J3KSC0 135 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 FOXE1O00358 373 aaPredicted RBP12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 ABCD4O14678 606 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 TCF21O43680 179 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 FADS1O60427 444 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 KERAO60938 352 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 ADAP00813 363 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 COL6A2P12110 1019 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 IVDP26440 423 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 RFX3P48380 749 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 GZMKP49863 264 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 RAB10P61026 200 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 ZNF155Q12901 538 aaPredicted RBP12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 FRG1Q14331 258 aaKnown RBP12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 RAB35Q15286 201 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 PFKFB4Q16877 469 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 ZNF628Q5EBL2 1059 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 TFAP2EQ6VUC0 442 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 RAPH1Q70E73 1250 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 PAGE2Q7Z2X7 111 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 GOLGA7Q7Z5G4 137 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 ISCA2Q86U28 154 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 CCDC116Q8IYX3 515 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 GABRG1Q8N1C3 465 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 PIAS4Q8N2W9 510 aaPredicted RBP12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 OR9A2Q8NGT5 310 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 OR2W6PQ8NHA6 318 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 HSD17B8Q92506 261 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 SLC9A6Q92581 669 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 KISS1RQ969F8 398 aaPredicted RBP12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 MSI2Q96DH6 328 aaKnown RBP12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 GPR22Q99680 433 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 GRIP2Q9C0E4 1043 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 IPPKQ9H8X2 491 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 SDHAF3Q9NRP4 125 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 TXNDC16Q9P2K2 825 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 ZNF780BQ9Y6R6 833 aa12.55□□□□□ -0.4
CSNK1D-224ENST00000584672 LYZL6O75951 148 aa12.54□□□□□ -0.4
CSNK1D-224ENST00000584672 PYGBP11216 843 aa12.54□□□□□ -0.4
CSNK1D-224ENST00000584672 MTHFD2P13995 350 aa12.54□□□□□ -0.4
CSNK1D-224ENST00000584672 GFAPP14136 432 aa12.54□□□□□ -0.4
CSNK1D-224ENST00000584672 EGR1P18146 543 aa12.54□□□□□ -0.4
CSNK1D-224ENST00000584672 PTMSP20962 102 aa12.54□□□□□ -0.4
CSNK1D-224ENST00000584672 ARL4CP56559 192 aa12.54□□□□□ -0.4
CSNK1D-224ENST00000584672 MRPS22P82650 360 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-224ENST00000584672 SPOCK1Q08629 439 aa12.54□□□□□ -0.4
CSNK1D-224ENST00000584672 GTF2H2Q13888 395 aa12.54□□□□□ -0.4
CSNK1D-224ENST00000584672 SQLEQ14534 574 aa12.54□□□□□ -0.4
CSNK1D-224ENST00000584672 ZKSCAN8Q15776 578 aaPredicted RBP12.54□□□□□ -0.4
CSNK1D-224ENST00000584672 ERCC6LQ2NKX8 1250 aa12.54□□□□□ -0.4
CSNK1D-224ENST00000584672 FAM174BQ3ZCQ3 159 aa12.54□□□□□ -0.4
CSNK1D-224ENST00000584672 C11orf71Q6IPW1 123 aa12.54□□□□□ -0.4
CSNK1D-224ENST00000584672 GTF2H2CQ6P1K8 395 aa12.54□□□□□ -0.4
CSNK1D-224ENST00000584672 BHLHA15Q7RTS1 189 aaPredicted RBP12.54□□□□□ -0.4
CSNK1D-224ENST00000584672 COMMD6Q7Z4G1 85 aa12.54□□□□□ -0.4
CSNK1D-224ENST00000584672 ABHD3Q8WU67 409 aa12.54□□□□□ -0.4
CSNK1D-224ENST00000584672 TM4SF18Q96CE8 201 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms