RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 CALHM2Q9HA72 323 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 SERHLQ9NQF3 203 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 TAS2R7Q9NYW3 318 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 METRNQ9UJH8 293 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 CDC42EP3Q9UKI2 254 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 MRPS18CQ9Y3D5 142 aaKnown RBP10.1□□□□□ -0.79
CCDC47-206ENST00000584112 POLR3HQ9Y535 204 aaPredicted RBP10.1□□□□□ -0.79
CCDC47-206ENST00000584112 HEATR5AQ86XA9 2040 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 A0A1W2PPR1 153 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 MBD3L4A6NDZ8 208 aaPredicted RBP10.09□□□□□ -0.79
CCDC47-206ENST00000584112 MBD3L3A6NE82 208 aaPredicted RBP10.09□□□□□ -0.79
CCDC47-206ENST00000584112 MBD3L5A6NJ08 208 aaPredicted RBP10.09□□□□□ -0.79
CCDC47-206ENST00000584112 SLC28A1O00337 649 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 SYT5O00445 386 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 PLOD2O00469 737 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 RGS14O43566 566 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 SEC22BO75396 215 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 CHEK2O96017 543 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 JUNP05412 331 aaKnown RBP10.09□□□□□ -0.79
CCDC47-206ENST00000584112 IFI6P09912 130 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 NEFHP12036 1026 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 CPN1P15169 458 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 KRT4P19013 534 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 PRPH2P23942 346 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 SRD5A2P31213 254 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 UQCRC1P31930 480 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 OPRM1P35372 400 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 ZNHIT3Q15649 155 aaPredicted RBP10.09□□□□□ -0.79
CCDC47-206ENST00000584112 FBXL19-AS1Q494R0 122 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 DCST1Q5T197 706 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 NOXRED1Q6NXP6 359 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 AAGABQ6PD74 315 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 PRSS57Q6UWY2 283 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 NPSR1Q6W5P4 371 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 RIBC1Q8N443 379 aaPredicted RBP10.09□□□□□ -0.79
CCDC47-206ENST00000584112 WDSUB1Q8N9V3 476 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 NAXEQ8NCW5 288 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 MBD3L2Q8NHZ7 208 aaPredicted RBP10.09□□□□□ -0.79
CCDC47-206ENST00000584112 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.09□□□□□ -0.79
CCDC47-206ENST00000584112 EPS8L3Q8TE67 593 aaKnown RBP10.09□□□□□ -0.79
CCDC47-206ENST00000584112 RNASE6Q93091 150 aaKnown RBP10.09□□□□□ -0.79
CCDC47-206ENST00000584112 ZFP3Q96NJ6 502 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 TRMOQ9BU70 441 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 L2HGDHQ9H9P8 463 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 DDX18Q9NVP1 670 aaKnown RBP10.09□□□□□ -0.79
CCDC47-206ENST00000584112 TAS2R10Q9NYW0 307 aa10.09□□□□□ -0.79
CCDC47-206ENST00000584112 MRTO4Q9UKD2 239 aaKnown RBP10.09□□□□□ -0.79
CCDC47-206ENST00000584112 TTC36A6NLP5 189 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 NPIPB8E9PQR5 432 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 H0Y3Z8 333 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 AZIN1O14977 448 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 IL18BPO95998 194 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 GRK2P25098 689 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 CTSSP25774 331 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 EVI2BP34910 448 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 MC3RP41968 323 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 ZNF136P52737 540 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 PSMD4P55036 377 aaKnown RBP10.08□□□□□ -0.8
CCDC47-206ENST00000584112 GFRA1P56159 465 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 WNT3P56703 355 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 PSG6Q00889 435 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 SLC18A2Q05940 514 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 DECR1Q16698 335 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 CYP27C1Q4G0S4 372 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 FLYWCH1Q4VC44 716 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 TMEM107Q6UX40 140 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 RNF165Q6ZSG1 346 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 KIF18BQ86Y91 864 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 TRIM42Q8IWZ5 723 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 C4orf33Q8N1A6 199 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 LRRC75A-AS1Q8N1F1 130 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 RNF138Q8WVD3 245 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 EFHD2Q96C19 240 aaPredicted RBP10.08□□□□□ -0.8
CCDC47-206ENST00000584112 ZNF764Q96H86 408 aaPredicted RBP10.08□□□□□ -0.8
CCDC47-206ENST00000584112 TM9SF2Q99805 663 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 SH3GL2Q99962 352 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 ACBD3Q9H3P7 528 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 GLIPR2Q9H4G4 154 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 C3orf14Q9HBI5 128 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 Q9N2J8 555 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 SDHAF3Q9NRP4 125 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 C1orf109Q9NX04 203 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 MKS1Q9NXB0 559 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 DKKL1Q9UK85 242 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 ABCG2Q9UNQ0 655 aa10.08□□□□□ -0.8
CCDC47-206ENST00000584112 C19orf53Q9UNZ5 99 aaPredicted RBP10.08□□□□□ -0.8
CCDC47-206ENST00000584112 KDM4EB2RXH2 506 aaPredicted RBP10.07□□□□□ -0.8
CCDC47-206ENST00000584112 PDPK1O15530 556 aa10.07□□□□□ -0.8
CCDC47-206ENST00000584112 TRIM13O60858 407 aa10.07□□□□□ -0.8
CCDC47-206ENST00000584112 NME6O75414 186 aaPredicted RBP10.07□□□□□ -0.8
CCDC47-206ENST00000584112 PSMG1O95456 288 aa10.07□□□□□ -0.8
CCDC47-206ENST00000584112 TMIGD3P0DMS9 266 aaPredicted RBP10.07□□□□□ -0.8
CCDC47-206ENST00000584112 DDX5P17844 614 aaKnown RBP10.07□□□□□ -0.8
CCDC47-206ENST00000584112 CHMP24386 653 aa10.07□□□□□ -0.8
CCDC47-206ENST00000584112 DPP4P27487 766 aa10.07□□□□□ -0.8
CCDC47-206ENST00000584112 CLK3P49761 638 aaKnown RBP10.07□□□□□ -0.8
CCDC47-206ENST00000584112 GANABQ14697 944 aaKnown RBP10.07□□□□□ -0.8
CCDC47-206ENST00000584112 PCLAFQ15004 111 aa10.07□□□□□ -0.8
CCDC47-206ENST00000584112 POU4F3Q15319 338 aa10.07□□□□□ -0.8
CCDC47-206ENST00000584112 SH2D4BQ5SQS7 431 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms