RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 DLGAP1O14490 977 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 ADAMDEC1O15204 470 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 HCRTR2O43614 444 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 SNAP91O60641 907 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 MITFO75030 526 aaPredicted RBP3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 GRAP2O75791 330 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 ZMPSTE24O75844 475 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 NGFP01138 241 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 NPPAP01160 153 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 CHRNGP07510 517 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 IQCF3P0C7M6 154 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 SLC35E2BP0CK96 405 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 CXCL8P10145 99 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 HSD17B1P14061 328 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 CD1EP15812 388 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 GOT1P17174 413 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 ANXA7P20073 488 aaKnown RBP3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 RPS12P25398 132 aaKnown RBP3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 ITGA3P26006 1051 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 PTPN3P26045 913 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 DCKP27707 260 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 PSMB4P28070 264 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 EPHA2P29317 976 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 SLC26A3P40879 764 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 RGS7P49802 495 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 ERFP50548 548 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 RAB28P51157 221 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 MMP15P51511 669 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 NDST2P52849 883 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 NAGLUP54802 743 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 PKNOX1P55347 436 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 CD81P60033 236 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 CRADDP78560 199 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 PLOD1Q02809 727 aaPredicted RBP3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 RELAQ04206 551 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 BST2Q10589 180 aaKnown RBP3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 MERTKQ12866 999 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 RALGDSQ12967 914 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 PEX6Q13608 980 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 ITGA7Q13683 1181 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 GK3PQ14409 553 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 SQLEQ14534 574 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 TMEM132DQ14C87 1099 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 PPA1Q15181 289 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 TGFBIQ15582 683 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 UGP2Q16851 508 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 HYAL4Q2M3T9 481 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 GOLGA7BQ2TAP0 167 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 COQ5Q5HYK3 327 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 SAMD4BQ5PRF9 694 aaKnown RBP3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 NDUFAF5Q5TEU4 345 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 PWWP2BQ6NUJ5 590 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 PRMT9Q6P2P2 845 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 CASC4Q6P4E1 433 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 ALKAL1Q6UXT8 129 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 ZBTB49Q6ZSB9 765 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 LPCAT2Q7L5N7 544 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 NUP54Q7Z3B4 507 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 CMC1Q7Z7K0 106 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 LINC00523Q86TU6 105 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 IQCHQ86VS3 1027 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 ERO1BQ86YB8 467 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 SLC5A8Q8N695 610 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 CCDC185Q8N715 623 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 C12orf29Q8N999 325 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 LEMD2Q8NC56 503 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 TRPV3Q8NET8 790 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 OR52K1Q8NGK4 314 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 GRHL3Q8TE85 626 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 TRUB1Q8WWH5 349 aaKnown RBP3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 MR1Q95460 341 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 BORCS5Q969J3 196 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 NTAN1Q96AB6 310 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 TMIGD2Q96BF3 282 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 CCDC124Q96CT7 223 aaKnown RBP3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 RMND5BQ96G75 393 aaPredicted RBP3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 GMPPAQ96IJ6 420 aaPredicted RBP3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 VPS39Q96JC1 886 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 DNAJC1Q96KC8 554 aaKnown RBP3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 AGAP3Q96P47 875 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 PPP1R2P1Q96PQ5 205 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 LGMNQ99538 433 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 HNRNPABQ99729 332 aaKnown RBP3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 MRPL57Q9BQC6 102 aaKnown RBP3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 SLC25A23Q9BV35 468 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 SHCBP1LQ9BZQ2 653 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 MINDY3Q9H8M7 445 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 MEAF6Q9HAF1 191 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 EML4Q9HC35 981 aaKnown RBP3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 MYOZ2Q9NPC6 264 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 MBNL1Q9NR56 388 aaKnown RBP3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 HPF1Q9NWY4 346 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 GDAP2Q9NXN4 497 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 ABCD2Q9UBJ2 740 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 GNPTGQ9UJJ9 305 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 FBXW11Q9UKB1 542 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 APPL1Q9UKG1 709 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 VANGL2Q9ULK5 521 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 NDUFAF1Q9Y375 327 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 LOC285556D6RIA3 1793 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms