RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 OR4N2Q8NGD1 307 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 HPS1Q92902 700 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 TMEM186Q96B77 213 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 C1GALT1C1Q96EU7 318 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 PTCD3Q96EY7 689 aaKnown RBP12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 SERPINB12Q96P63 405 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 GBP4Q96PP9 640 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 LRRC37BQ96QE4 947 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 SUCNR1Q9BXA5 334 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 TSGA10Q9BZW7 698 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 A0A0J9YW62 118 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 ATP6V1G2-DDX39BF2Z307 99 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 ACOX3O15254 700 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 PIN1P1O15428 100 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 TSPAN2O60636 221 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 RAD51DO75771 328 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 FAM58BPP0C7Q3 252 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 PGCP20142 388 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 TPSB2P20231 275 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 MDKP21741 143 aaPredicted RBP12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 PCMT1P22061 227 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 IGHV1-2P23083 117 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 SHC1P29353 583 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 IL12BP29460 328 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 HSPA7P48741 367 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 VPS41P49754 854 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 MRPS35P82673 323 aaKnown RBP12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 CHIT1Q13231 466 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 SCGB2A2Q13296 93 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 TSNQ15631 228 aaKnown RBP12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 TPSAB1Q15661 275 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 TRMT12Q53H54 448 aaKnown RBP12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 HBMQ6B0K9 141 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 ZCCHC24Q8N2G6 241 aaKnown RBP12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 SPATA6LQ8N4H0 392 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 ZNF540Q8NDQ6 660 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 OR2V1Q8NHB1 315 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 SLC35A4Q96G79 324 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 CCT8L2Q96SF2 557 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 ZNF717Q9BY31 904 aaPredicted RBP12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 SRXN1Q9BYN0 137 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 MYNNQ9NPC7 610 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 GLRX2Q9NS18 164 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 DDX28Q9NUL7 540 aaKnown RBP12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 ZDHHC2Q9UIJ5 367 aa12.31□□□□□ -0.44
CSNK1D-213ENST00000580446 A0A0A6YYD5 115 aa12.3□□□□□ -0.44
CSNK1D-213ENST00000580446 B4DSR2 109 aa12.3□□□□□ -0.44
CSNK1D-213ENST00000580446 SNUPNO95149 360 aaKnown RBP12.3□□□□□ -0.44
CSNK1D-213ENST00000580446 CPMP14384 443 aa12.3□□□□□ -0.44
CSNK1D-213ENST00000580446 DAOP14920 347 aa12.3□□□□□ -0.44
CSNK1D-213ENST00000580446 GGT1P19440 569 aa12.3□□□□□ -0.44
CSNK1D-213ENST00000580446 OMGP23515 440 aa12.3□□□□□ -0.44
CSNK1D-213ENST00000580446 APOBEC3AP31941 199 aaPredicted RBP12.3□□□□□ -0.44
CSNK1D-213ENST00000580446 EVI2BP34910 448 aa12.3□□□□□ -0.44
CSNK1D-213ENST00000580446 FEN1P39748 380 aaKnown RBP12.3□□□□□ -0.44
CSNK1D-213ENST00000580446 GANABQ14697 944 aaKnown RBP12.3□□□□□ -0.44
CSNK1D-213ENST00000580446 OR52E8Q6IFG1 317 aa12.3□□□□□ -0.44
CSNK1D-213ENST00000580446 NPSR1Q6W5P4 371 aa12.3□□□□□ -0.44
CSNK1D-213ENST00000580446 FRA10AC1Q70Z53 315 aa12.3□□□□□ -0.44
CSNK1D-213ENST00000580446 MARCH3Q86UD3 253 aa12.3□□□□□ -0.44
CSNK1D-213ENST00000580446 CARM1Q86X55 608 aa12.3□□□□□ -0.44
CSNK1D-213ENST00000580446 BPIFB2Q8N4F0 458 aa12.3□□□□□ -0.44
CSNK1D-213ENST00000580446 C2CD4AQ8NCU7 369 aaPredicted RBP12.3□□□□□ -0.44
CSNK1D-213ENST00000580446 DUSP19Q8WTR2 217 aa12.3□□□□□ -0.44
CSNK1D-213ENST00000580446 RGMAQ96B86 450 aa12.3□□□□□ -0.44
CSNK1D-213ENST00000580446 DTNBP1Q96EV8 351 aa12.3□□□□□ -0.44
CSNK1D-213ENST00000580446 PITHD1Q9GZP4 211 aaPredicted RBP12.3□□□□□ -0.44
CSNK1D-213ENST00000580446 MAT2BQ9NZL9 334 aa12.3□□□□□ -0.44
CSNK1D-213ENST00000580446 KLHL13Q9P2N7 655 aa12.3□□□□□ -0.44
CSNK1D-213ENST00000580446 MGAT4BQ9UQ53 548 aa12.3□□□□□ -0.44
CSNK1D-213ENST00000580446 IGHV3-15A0A0B4J1V0 119 aa12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 OR5H1A6NKK0 313 aa12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 MFAP3LO75121 409 aa12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 IGHV3-9P01782 118 aa12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 AHSGP02765 367 aa12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 PCSK2P16519 638 aa12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 DRD5P21918 477 aa12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 PTAFRP25105 342 aa12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 PPICP45877 212 aa12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 EMDP50402 254 aa12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 SNRPD2P62316 118 aaKnown RBP12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 IRF8Q02556 426 aa12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 PRICKLE4Q2TBC4 344 aa12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 TIMM23BQ5SRD1 257 aa12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 MRM1Q6IN84 353 aaKnown RBP12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 LEG1Q6P5S2 330 aa12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 CYP20A1Q6UW02 462 aa12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 SPATA19Q7Z5L4 167 aa12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 ZCCHC7Q8N3Z6 543 aaKnown RBP12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 GBP7Q8N8V2 638 aaPredicted RBP12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 LRRC57Q8N9N7 239 aa12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 RNF128Q8TEB7 428 aa12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 RNF138Q8WVD3 245 aa12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 ANKRD7Q92527 254 aa12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 OSTF1Q92882 214 aa12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 MTERF1Q99551 399 aaKnown RBP12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 FAM167BQ9BTA0 163 aa12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 EFCAB11Q9BUY7 163 aa12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 TSPY26PQ9H489 355 aa12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 GPRC5BQ9NZH0 403 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms