RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 CCKBRP32239 447 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 WDR5P61964 334 aaKnown RBP11.34□□□□□ -0.59
ERBB2-206ENST00000578373 RPS21P63220 83 aaKnown RBP11.34□□□□□ -0.59
ERBB2-206ENST00000578373 ITPRIPL2Q3MIP1 535 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 CSNK1A1LQ8N752 337 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 OR8J2Q8NGG1 315 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 LMX1AQ8TE12 382 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 ADAMTS7Q9UKP4 1686 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 SMLR1H3BR10 107 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 SLC16A6O15403 523 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 CDC40O60508 579 aaKnown RBP eCLIP11.34□□□□□ -0.59
ERBB2-206ENST00000578373 ZNF888P0CJ79 500 aaPredicted RBP11.34□□□□□ -0.59
ERBB2-206ENST00000578373 GPX2P18283 190 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 SUOXP51687 545 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 SLC14A1Q13336 389 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 LRRC26Q2I0M4 334 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 SLC39A5Q6ZMH5 540 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 SLC46A3Q7Z3Q1 461 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 NOXA1Q86UR1 476 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 BOLLQ8N9W6 283 aaKnown RBP11.34□□□□□ -0.59
ERBB2-206ENST00000578373 OR56A3Q8NH54 315 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 TMEM41AQ96HV5 264 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 RAD9AQ99638 391 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 ZNF471Q9BX82 626 aaPredicted RBP11.34□□□□□ -0.59
ERBB2-206ENST00000578373 OR2S2Q9NQN1 319 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 TMEM5Q9Y2B1 443 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 TCRBV5S2A0A599 114 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 SLC22A31A6NKX4 558 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 TSPAN12O95859 305 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 APOC3P02656 99 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 ERP29P30040 261 aaKnown RBP11.34□□□□□ -0.59
ERBB2-206ENST00000578373 RPS25P62851 125 aaKnown RBP11.34□□□□□ -0.59
ERBB2-206ENST00000578373 SEC23BQ15437 767 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 CDKL4Q5MAI5 379 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 GDPD1Q8N9F7 314 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 FCAMRQ8WWV6 532 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 SMARCD2Q92925 531 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 NTN4Q9HB63 628 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 POLMQ9NP87 494 aaPredicted RBP11.34□□□□□ -0.59
ERBB2-206ENST00000578373 PRTFDC1Q9NRG1 225 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 GPN3Q9UHW5 284 aaPredicted RBP11.34□□□□□ -0.59
ERBB2-206ENST00000578373 PCDHGA6Q9Y5G7 932 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 SNX11Q9Y5W9 270 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 GXYLT2A0PJZ3 443 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 CLDN24A6NM45 220 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 TEX46H3BTG2 121 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 RBBP9O75884 186 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 PEX11BO96011 259 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 TNFP01375 233 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 PRMT2P55345 433 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 YBX1P67809 324 aaKnown RBP11.34□□□□□ -0.59
ERBB2-206ENST00000578373 CD300CQ08708 224 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 LTB4RQ15722 352 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 GPR19Q15760 415 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 HNRNPA1L2Q32P51 320 aaKnown RBP11.34□□□□□ -0.59
ERBB2-206ENST00000578373 KDM4DQ6B0I6 523 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 FIGLAQ6QHK4 219 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 L3MBTL4Q8NA19 623 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 FKBP10Q96AY3 582 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 MROQ9BYG7 248 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 MYNNQ9NPC7 610 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 TMEM45AQ9NWC5 275 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 ZNF639Q9UID6 485 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 CYP8B1Q9UNU6 501 aa11.34□□□□□ -0.59
ERBB2-206ENST00000578373 A0A0G2JPF8 293 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 TVP23AA6NH52 213 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 HNRNPCL3B7ZW38 293 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 COQ9O75208 318 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 F11P03951 625 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 HNRNPCL4P0DMR1 293 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 CR2P20023 1033 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 SLC19A1P41440 591 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 CASP3P42574 277 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 ACVR1Q04771 509 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 RUNX3Q13761 415 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 C18orf63Q68DL7 685 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 OR6T1Q8NGN1 323 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 CHMP1AQ9HD42 196 aaPredicted RBP11.33□□□□□ -0.6
ERBB2-206ENST00000578373 IER3IP1Q9Y5U9 82 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 ICE1Q9Y2F5 2266 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 ASPDHA6ND91 283 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 RGS9O75916 674 aaPredicted RBP11.33□□□□□ -0.6
ERBB2-206ENST00000578373 PRH1P02810 166 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 LIPCP11150 499 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 APEHP13798 732 aaKnown RBP11.33□□□□□ -0.6
ERBB2-206ENST00000578373 ITGB8P26012 769 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 MAOBP27338 520 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 CLDN12P56749 244 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 OC90Q02509 493 aaPredicted RBP11.33□□□□□ -0.6
ERBB2-206ENST00000578373 ERV3-1Q14264 604 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 INAVAQ3KP66 663 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 SYT6Q5T7P8 510 aaPredicted RBP11.33□□□□□ -0.6
ERBB2-206ENST00000578373 XKRXQ6PP77 449 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 LYSMD2Q8IV50 215 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 PRR22Q8IZ63 422 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 OR52E1Q8NGJ3 308 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 CMKLR1Q99788 373 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 ACTRT3Q9BYD9 372 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 ATG5Q9H1Y0 275 aa11.33□□□□□ -0.6
ERBB2-206ENST00000578373 MTHFD2LQ9H903 347 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms