RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 EPS8L3Q8TE67 593 aaKnown RBP13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 DUSP19Q8WTR2 217 aa13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 DACH2Q96NX9 599 aa13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 ALPK1Q96QP1 1244 aa13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 LMF2Q9BU23 707 aaKnown RBP13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 TMUB1Q9BVT8 246 aa13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 LRTM1Q9HBL6 345 aa13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 EQTNQ9NQ60 294 aa13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 FAM120CQ9NX05 1096 aaKnown RBP13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 MID2Q9UJV3 735 aa13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 CCL27Q9Y4X3 112 aa13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 PTGDR2Q9Y5Y4 395 aa13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 SETD2Q9BYW2 2564 aaPredicted RBP13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 MTORP42345 2549 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 ACANP16112 2415 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 MAP1AP78559 2803 aaPredicted RBP13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 A0A1W2PNV4 684 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 SLC22A20A6NK97 555 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 TTC36A6NLP5 189 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 A8MXE2 369 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 H3BML4 177 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 CASKO14936 926 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 AZIN1O14977 448 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 SEC14L5O43304 696 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 DIAPH2O60879 1101 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 TNFSF13O75888 250 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 SMNDC1O75940 238 aaKnown RBP eCLIP13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 KCNH1O95259 989 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 UTS2O95399 124 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 RAF1P04049 648 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 CRHP06850 196 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 PRPS2P11908 318 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 KLK2P20151 261 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 PRPH2P23942 346 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 GABRA3P34903 492 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 EEFSECP57772 596 aaKnown RBP13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 POU4F3Q15319 338 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 OR2A2Q6IF42 318 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 ANKRD26P1Q6NSI1 321 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 SZRD1Q7Z422 152 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 C10orf107Q8IVU9 208 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 CNEP1R1Q8N9A8 125 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 ZFP28Q8NHY6 868 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 CIDECQ96AQ7 238 aaPredicted RBP13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 PIGQQ9BRB3 760 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 PINK1Q9BXM7 581 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 TBL1XR1Q9BZK7 514 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 RTN4RQ9BZR6 473 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 IQCGQ9H095 443 aaKnown RBP13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 NDRG3Q9UGV2 375 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 ZNF337Q9Y3M9 751 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 ARID1AO14497 2285 aa13.49□□□□□ -0.25
RN7SL560P-201ENST00000577943 DSCAMO60469 2012 aa13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 GXYLT2A0PJZ3 443 aa13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 NPIPB8E9PQR5 432 aa13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 LINC01387J3KSC0 135 aa13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 MSTNO14793 375 aa13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 AKAP10O43572 662 aa13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 GMFGO60234 142 aa13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 CHEK2O96017 543 aa13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 IFI6P09912 130 aa13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 NEFHP12036 1026 aa13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 SUCLG1P53597 346 aaKnown RBP13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 PRKAG1P54619 331 aa13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 MANFP55145 182 aaKnown RBP13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 RPL38P63173 70 aaKnown RBP13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 C17orf67Q0P5P2 114 aa13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 VWA1Q6PCB0 445 aa13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 Q6ZSR9 355 aa13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 OR5M1Q8NGP8 315 aa13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 GPR151Q8TDV0 419 aa13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 SMPDL3BQ92485 455 aa13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 FIG4Q92562 907 aa13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 PIK3R3Q92569 461 aa13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 PPCDCQ96CD2 204 aa13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 MBD6Q96DN6 1003 aa13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 TRIM44Q96DX7 344 aaPredicted RBP13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 ZBED6CLQ96FA7 236 aaPredicted RBP13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 TSSK3Q96PN8 268 aa13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 CCT7Q99832 543 aa13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 GATA5Q9BWX5 397 aaPredicted RBP13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 REEP4Q9H6H4 257 aa13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 PLEKHF2Q9H8W4 249 aa13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 SH3BP4Q9P0V3 963 aa13.48□□□□□ -0.25
RN7SL560P-201ENST00000577943 TLDC2A0PJX2 215 aa13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 OR2M5A3KFT3 312 aa13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 H0YC42 278 aa13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 TRIM13O60858 407 aa13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 TNFRSF21O75509 655 aa13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 ATE1O95260 518 aa13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 ANGPTL1O95841 491 aa13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 HRGP04196 525 aa13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 LINC00032P0C843 101 aa13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 SDC1P18827 310 aa13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 TPD52P55327 224 aaPredicted RBP13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 CLDN15P56746 228 aa13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 SIRPAP78324 504 aa13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 SLC18A2Q05940 514 aa13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 PCLAFQ15004 111 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms