RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 HTR5AP47898 357 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 SULT1E1P49888 294 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 SGSHP51688 502 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 HMGCS2P54868 508 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 NAPAP54920 295 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 OSTNP61366 133 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 ITPK1Q13572 414 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 RUNX3Q13761 415 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 ZMYND11Q15326 602 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 CD226Q15762 336 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 CAMK4Q16566 473 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 CCL14Q16627 93 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 PPP1R3AQ16821 1122 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 Q1RN00 199 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 C17orf58Q2M2W7 97 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 KCTD21Q4G0X4 260 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 LRRC23Q53EV4 343 aaPredicted RBP1.98□□□□□ -2.09
COPS3-213ENST00000577210 EIPR1Q53HC9 387 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 TMEM41BQ5BJD5 291 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 ZNF311Q5JNZ3 666 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 RABGAP1LQ5R372 815 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 BEND6Q5SZJ8 279 aaPredicted RBP1.98□□□□□ -2.09
COPS3-213ENST00000577210 LEMD1Q68G75 181 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 SPINK14Q6IE38 97 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 RFWD3Q6PCD5 774 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 VITQ6UXI7 678 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 PAQR9Q6ZVX9 377 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 LRRC70Q7Z2Q7 622 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 VASH2Q86V25 355 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 CCDC36Q8IYA8 594 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 SLC22A18ASQ8N1D0 253 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 ZCCHC7Q8N3Z6 543 aaKnown RBP1.98□□□□□ -2.09
COPS3-213ENST00000577210 FAM133AQ8N9E0 248 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 EIF1ADQ8N9N8 165 aaKnown RBP1.98□□□□□ -2.09
COPS3-213ENST00000577210 ZNRF1Q8ND25 227 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 OR52M1Q8NGK5 317 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 OR4Q3Q8NH05 313 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 OR52J3Q8NH60 311 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 CRYGNQ8WXF5 182 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 DLX4Q92988 240 aaPredicted RBP1.98□□□□□ -2.09
COPS3-213ENST00000577210 LHX4Q969G2 390 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 NTNG2Q96CW9 530 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 RAB3CQ96E17 227 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 VSTM2LQ96N03 204 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 VPS35Q96QK1 796 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 OR5M11Q96RB7 305 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 ZNF607Q96SK3 696 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 CCT7Q99832 543 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 FEM1AQ9BSK4 669 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 TCHPQ9BT92 498 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 APOOQ9BUR5 198 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 NT5C3AQ9H0P0 336 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 DHX33Q9H6R0 707 aaKnown RBP1.98□□□□□ -2.09
COPS3-213ENST00000577210 ALG9Q9H6U8 611 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 COG4Q9H9E3 785 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 NRN1Q9NPD7 142 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 EXOSC3Q9NQT5 275 aaKnown RBP1.98□□□□□ -2.09
COPS3-213ENST00000577210 RBM28Q9NW13 759 aaKnown RBP1.98□□□□□ -2.09
COPS3-213ENST00000577210 GPR83Q9NYM4 423 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 PTBP2Q9UKA9 531 aaKnown RBP1.98□□□□□ -2.09
COPS3-213ENST00000577210 FZR1Q9UM11 496 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 CLEC4AQ9UMR7 237 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 EIF3LQ9Y262 564 aaKnown RBP1.98□□□□□ -2.09
COPS3-213ENST00000577210 RNF115Q9Y4L5 304 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 KIF16BQ96L93 1317 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 C15orf38-AP3S2A0A0A6YYH1 394 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 ZNF840PA6NDX5 716 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 JAK2O60674 1132 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 SRPX2O60687 465 aaPredicted RBP1.97□□□□□ -2.09
COPS3-213ENST00000577210 SPAG6O75602 509 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 SURF6O75683 361 aaKnown RBP1.97□□□□□ -2.09
COPS3-213ENST00000577210 MFN2O95140 757 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 GJB5O95377 273 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 ADCY5O95622 1261 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 OAS1P00973 400 aaKnown RBP1.97□□□□□ -2.09
COPS3-213ENST00000577210 IL1BP01584 269 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 HOXB7P09629 217 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 GATA2P23769 480 aaPredicted RBP1.97□□□□□ -2.09
COPS3-213ENST00000577210 IGFBP5P24593 272 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 CA8P35219 290 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 RFC2P35250 354 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 RGS4P49798 205 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 STK19P49842 368 aaPredicted RBP1.97□□□□□ -2.09
COPS3-213ENST00000577210 DSCR10P59022 87 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 SPIBQ01892 262 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 PJVKQ0ZLH3 352 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 CYLC2Q14093 348 aaPredicted RBP1.97□□□□□ -2.09
COPS3-213ENST00000577210 LTB4RQ15722 352 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 MAPK6Q16659 721 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 ZSWIM7Q19AV6 140 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 ZNF699Q32M78 642 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 LRIT3Q3SXY7 679 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 ACER2Q5QJU3 275 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 ATAD3CQ5T2N8 411 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 ATF7IP2Q5U623 682 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 MARC1Q5VT66 337 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 ZNF774Q6NX45 483 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 PNCKQ6P2M8 343 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 NIPAL3Q6P499 406 aa1.97□□□□□ -2.09
COPS3-213ENST00000577210 LEG1Q6P5S2 330 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms