RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 RTN4RQ9BZR6 473 aa8.68□□□□□ -1.02
NPLOC4-219ENST00000576713 DPY30Q9C005 99 aa8.68□□□□□ -1.02
NPLOC4-219ENST00000576713 ZNF385DQ9H6B1 395 aa8.68□□□□□ -1.02
NPLOC4-219ENST00000576713 TCF7L2Q9NQB0 619 aa8.68□□□□□ -1.02
NPLOC4-219ENST00000576713 SERHLQ9NQF3 203 aa8.68□□□□□ -1.02
NPLOC4-219ENST00000576713 SDR39U1Q9NRG7 319 aaPredicted RBP8.68□□□□□ -1.02
NPLOC4-219ENST00000576713 FGFR1OP2Q9NVK5 253 aa8.68□□□□□ -1.02
NPLOC4-219ENST00000576713 DDX18Q9NVP1 670 aaKnown RBP8.68□□□□□ -1.02
NPLOC4-219ENST00000576713 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.68□□□□□ -1.02
NPLOC4-219ENST00000576713 GPATCH2Q9NW75 528 aa8.68□□□□□ -1.02
NPLOC4-219ENST00000576713 FBXO34Q9NWN3 711 aa8.68□□□□□ -1.02
NPLOC4-219ENST00000576713 HPF1Q9NWY4 346 aa8.68□□□□□ -1.02
NPLOC4-219ENST00000576713 ABI3Q9P2A4 366 aa8.68□□□□□ -1.02
NPLOC4-219ENST00000576713 CNOT11Q9UKZ1 510 aaKnown RBP8.68□□□□□ -1.02
NPLOC4-219ENST00000576713 PCDHGB6Q9Y5F9 930 aa8.68□□□□□ -1.02
NPLOC4-219ENST00000576713 NPFFR2Q9Y5X5 522 aa8.68□□□□□ -1.02
NPLOC4-219ENST00000576713 COPG1Q9Y678 874 aaKnown RBP8.68□□□□□ -1.02
NPLOC4-219ENST00000576713 KCNE3Q9Y6H6 103 aa8.68□□□□□ -1.02
NPLOC4-219ENST00000576713 SHISA3A0PJX4 238 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 FRG2CA6NGY1 282 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 LRRC3CA6NJW4 275 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 TO15178 435 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 UBDO15205 165 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 TSPAN2O60636 221 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 RASAL1O95294 804 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 TGDSO95455 350 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 RFPL3SP0C7P2 107 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 GNLYP22749 145 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 PTPN6P29350 595 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 MDH1P40925 334 aaKnown RBP8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 MEOX1P50221 254 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 CASP9P55211 416 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 HSF1Q00613 529 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 SRSF1Q07955 248 aaKnown RBP eCLIP8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 DUSP5Q16690 384 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 PDCD4Q53EL6 469 aaKnown RBP8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 FNDC7Q5VTL7 733 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 MFSD12Q6NUT3 480 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 OPN5Q6U736 354 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 RTL4Q6ZR62 310 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 OLIG3Q7RTU3 272 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 FGD2Q7Z6J4 655 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 SLC44A2Q8IWA5 706 aaPredicted RBP8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 KIRREL3Q8IZU9 778 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 SLC15A4Q8N697 577 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 EXPH5Q8NEV8 1989 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 NUP43Q8NFH3 380 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 OR2M7Q8NG81 312 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 SLC22A8Q8TCC7 542 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 FAR1Q8WVX9 515 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 OR5P2Q8WZ92 322 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 TMBIM1Q969X1 311 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 VPS33AQ96AX1 596 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 EFHD2Q96C19 240 aaPredicted RBP8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 ERP27Q96DN0 273 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 OMA1Q96E52 524 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 C5orf34Q96MH7 638 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 ZNF317Q96PQ6 595 aaPredicted RBP8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 LMF2Q9BU23 707 aaKnown RBP8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 CCDC134Q9H6E4 229 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 GP6Q9HCN6 339 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 SLC52A3Q9NQ40 469 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 TUBA8Q9NY65 449 aaPredicted RBP8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 SNX8Q9Y5X2 465 aa8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 USP9XQ93008 2570 aaPredicted RBP8.67□□□□□ -1.02
NPLOC4-219ENST00000576713 H3BS24 57 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 DYNC1I1O14576 645 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 EMC8O43402 210 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 PPM1BO75688 479 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 GLSO94925 669 aaPredicted RBP8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 NKX2-2O95096 273 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 CBX6O95503 412 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 HMGN2P05204 90 aaKnown RBP8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 GSNP06396 782 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 IFI6P09912 130 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 IDO1P14902 403 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 RPL3P39023 403 aaKnown RBP8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 CASP3P42574 277 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 MAN2A2P49641 1150 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 PLCXD2Q0VAA5 305 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 RPS6KA2Q15349 733 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 GTDC1Q4AE62 458 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 HSP90B2PQ58FF3 399 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 HLA-DQA1Q5Y7H0 255 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 SZRD1Q7Z422 152 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 THAP5Q7Z6K1 395 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 GPALPP1Q8IXQ4 340 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 SLC34A3Q8N130 599 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 FBXW8Q8N3Y1 598 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 ZFP62Q8NB50 900 aaPredicted RBP8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 TMEM178AQ8NBL3 297 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 OR52N2Q8NGI0 321 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 OR5D16Q8NGK9 328 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 ZFP28Q8NHY6 868 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 SPPL2AQ8TCT8 520 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 RNF138Q8WVD3 245 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 NR4A3Q92570 626 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 ADOQ96SZ5 270 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 KLHDC3Q9BQ90 382 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 CCDC28BQ9BUN5 200 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms