RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 EXOSC7Q15024 291 aaKnown RBP5.67□□□□□ -1.5
NUP88-212ENST00000576708 RPS6KA2Q15349 733 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 TOMM20Q15388 145 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 LTB4RQ15722 352 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 SLC25A35Q3KQZ1 300 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 ACSF3Q4G176 576 aaPredicted RBP5.67□□□□□ -1.5
NUP88-212ENST00000576708 CCDC92Q53HC0 331 aaPredicted RBP5.67□□□□□ -1.5
NUP88-212ENST00000576708 TCHHL1Q5QJ38 904 aaPredicted RBP5.67□□□□□ -1.5
NUP88-212ENST00000576708 CCNYL2Q5T2Q4 361 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 FRG2Q64ET8 278 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 TMEM198Q66K66 360 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 TTC19Q6DKK2 380 aaPredicted RBP5.67□□□□□ -1.5
NUP88-212ENST00000576708 YRDCQ86U90 279 aaKnown RBP5.67□□□□□ -1.5
NUP88-212ENST00000576708 TAGAPQ8N103 731 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 OR4F6Q8NGB9 312 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 REPS1Q96D71 796 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 ERP27Q96DN0 273 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 ZNF597Q96LX8 424 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 FRG2BQ96QU4 278 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 TRIB1Q96RU8 372 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 NODALQ96S42 347 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 HBEGFQ99075 208 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 SERPINI1Q99574 410 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 TIMP4Q99727 224 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 SH3GL2Q99962 352 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 PELOQ9BRX2 385 aaKnown RBP5.67□□□□□ -1.5
NUP88-212ENST00000576708 ITPAQ9BY32 194 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 UGT2B28Q9BY64 529 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 ANGPTL4Q9BY76 406 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 POLDIP3Q9BY77 421 aaKnown RBP5.67□□□□□ -1.5
NUP88-212ENST00000576708 NXF5Q9H1B4 397 aaKnown RBP5.67□□□□□ -1.5
NUP88-212ENST00000576708 ANKRA2Q9H9E1 313 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 WDR41Q9HAD4 459 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 EHD3Q9NZN3 535 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 XPR1Q9UBH6 696 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 ZNF69Q9UC07 566 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 BCAP29Q9UHQ4 241 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 CES1P1Q9UKY3 287 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 CAMK2AQ9UQM7 478 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 PLEKHA6Q9Y2H5 1048 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 C15orf41Q9Y2V0 281 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 KIAA1549Q9HCM3 1950 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 CCDC168Q8NDH2 2452 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 HSPB2A8KAH6 182 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 C17orf51A8MQB3 221 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 POC1B-GALNT4F8VUJ3 575 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 SYT5O00445 386 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 TP53I11O14683 189 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 UGDHO60701 494 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 ULK1O75385 1050 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 ERAL1O75616 437 aaKnown RBP5.66□□□□□ -1.5
NUP88-212ENST00000576708 PRKD3O94806 890 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 PDYNP01213 254 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 HPNP05981 417 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 ABCB1P08183 1280 aaPredicted RBP5.66□□□□□ -1.5
NUP88-212ENST00000576708 SBK3P0C264 359 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 CHN1P15882 459 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 PORP16435 677 aaPredicted RBP5.66□□□□□ -1.5
NUP88-212ENST00000576708 TCEA1P23193 301 aaKnown RBP5.66□□□□□ -1.5
NUP88-212ENST00000576708 CNTFP26441 200 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 ABCD3P28288 659 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 PTPN6P29350 595 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 CEACAM8P31997 349 aaPredicted RBP5.66□□□□□ -1.5
NUP88-212ENST00000576708 GALNSP34059 522 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 PTGDSP41222 190 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 MAGEA12P43365 314 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 SLCO1A2P46721 670 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 CLK1P49759 484 aaKnown RBP5.66□□□□□ -1.5
NUP88-212ENST00000576708 ZNF136P52737 540 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 ARFIP1P53367 373 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 MAPK12P53778 367 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 NAGLUP54802 743 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 MRPS35P82673 323 aaKnown RBP5.66□□□□□ -1.5
NUP88-212ENST00000576708 GALNT1Q10472 559 aaPredicted RBP5.66□□□□□ -1.5
NUP88-212ENST00000576708 TBL3Q12788 808 aaKnown RBP5.66□□□□□ -1.5
NUP88-212ENST00000576708 FOXF2Q12947 444 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 IFT88Q13099 833 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 PDCD1Q15116 288 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 CEBPEQ15744 281 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 HSPB2Q16082 182 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 PRICKLE4Q2TBC4 344 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 TRMT12Q53H54 448 aaKnown RBP5.66□□□□□ -1.5
NUP88-212ENST00000576708 TEX35Q5T0J7 233 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 C8orf74Q6P047 294 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 KLC3Q6P597 504 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 ANGPTL8Q6UXH0 198 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 ESPNLQ6ZVH7 1005 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 ZNF572Q7Z3I7 529 aaPredicted RBP5.66□□□□□ -1.5
NUP88-212ENST00000576708 COMMD6Q7Z4G1 85 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 CDC20BQ86Y33 519 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 DND1Q8IYX4 353 aaKnown RBP5.66□□□□□ -1.5
NUP88-212ENST00000576708 METTL4Q8N3J2 472 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 C9orf106Q8NAJ2 232 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 NOA1Q8NC60 698 aaKnown RBP5.66□□□□□ -1.5
NUP88-212ENST00000576708 C7orf57Q8NEG2 295 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 VPS37AQ8NEZ2 397 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 LINC01560Q8TB33 94 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 RDH11Q8TC12 318 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 ZNF483Q8TF39 744 aaPredicted RBP5.66□□□□□ -1.5
NUP88-212ENST00000576708 SLC44A1Q8WWI5 657 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms