RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 MTFR2Q6P444 385 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 TMEM81Q6P7N7 255 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 NATD1Q8N6N6 113 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 ZNF454Q8N9F8 522 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 CDRT4Q8N9R6 151 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 OR5M9Q8NGP3 310 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 OR1J4Q8NGS1 313 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 ZNF775Q96BV0 537 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-216ENST00000575599 COQ8BQ96D53 544 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 GIMAP5Q96F15 307 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 RMND5BQ96G75 393 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-216ENST00000575599 YIPF4Q9BSR8 244 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 MYLK2Q9H1R3 596 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 AIG1Q9NVV5 245 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 QPCTLQ9NXS2 382 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 FLRT3Q9NZU0 649 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 ARMCX1Q9P291 453 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 PLEKHB1Q9UF11 243 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-216ENST00000575599 MRTO4Q9UKD2 239 aaKnown RBP12.11□□□□□ -0.47
RPAIN-216ENST00000575599 MEMO1Q9Y316 297 aa12.11□□□□□ -0.47
RPAIN-216ENST00000575599 C15orf38-AP3S2A0A0A6YYH1 394 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 A0A1B0GVC2 190 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 AQP7O14520 342 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 SLC22A2O15244 555 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 SCO2O43819 266 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 SUSD5O60279 629 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 HCN1O60741 890 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 SLC22A3O75751 556 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 KCNH1O95259 989 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 CLDN1O95832 211 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 ALDOCP09972 364 aaKnown RBP12.1□□□□□ -0.47
RPAIN-216ENST00000575599 ACP2P11117 423 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 ENDOUP21128 410 aaKnown RBP12.1□□□□□ -0.47
RPAIN-216ENST00000575599 PTPN6P29350 595 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 EVI2BP34910 448 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 PRIM2P49643 509 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 SNTA1Q13424 505 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 TP53BP2Q13625 1128 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 LASP1Q14847 261 aaKnown RBP12.1□□□□□ -0.47
RPAIN-216ENST00000575599 PDCD4Q53EL6 469 aaKnown RBP12.1□□□□□ -0.47
RPAIN-216ENST00000575599 AGKQ53H12 422 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 MFSD12Q6NUT3 480 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 CCDC121Q6ZUS5 278 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 CAMKMTQ7Z624 323 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 GALNT10Q86SR1 603 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 CLECL1Q8IZS7 167 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 EID3Q8N140 333 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 FITM2Q8N6M3 262 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 OR5AK3PQ8NH89 298 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 CMTM5Q96DZ9 223 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 C16orf58Q96GQ5 468 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 TP63Q9H3D4 680 aaPredicted RBP12.1□□□□□ -0.47
RPAIN-216ENST00000575599 CXorf36Q9H7Y0 433 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 NEUROD4Q9HD90 331 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 SERHLQ9NQF3 203 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 PNPLA3Q9NST1 481 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 NTMQ9P121 344 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 SPRR3Q9UBC9 169 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 ACAD8Q9UKU7 415 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 HRH3Q9Y5N1 445 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 WIF1Q9Y5W5 379 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 PTPN13Q12923 2485 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 DNAJC13O75165 2243 aa12.1□□□□□ -0.47
RPAIN-216ENST00000575599 ICE1Q9Y2F5 2266 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 OR14I1A6ND48 311 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 TTC36A6NLP5 189 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 C9JVG2 144 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 E9PLN8 166 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 BCKDKO14874 412 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 NKX2-2O95096 273 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 IL33O95760 270 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 HMGN2P05204 90 aaKnown RBP12.09□□□□□ -0.47
RPAIN-216ENST00000575599 ALOX5P09917 674 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 GP1BBP13224 206 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 KIR3DL1P43629 444 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 CCT3P49368 545 aaKnown RBP12.09□□□□□ -0.47
RPAIN-216ENST00000575599 CLNS1AP54105 237 aaKnown RBP12.09□□□□□ -0.47
RPAIN-216ENST00000575599 PSMD4P55036 377 aaKnown RBP12.09□□□□□ -0.47
RPAIN-216ENST00000575599 HBA1P69905 142 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 ADORA2A-AS1P86434 159 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 KLF10Q13118 480 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 STX5Q13190 355 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 DUSP5Q16690 384 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 HIST2H2BCQ6DN03 193 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 OR5M10Q6IEU7 315 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 ZNF585AQ6P3V2 769 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 MAMDC2Q7Z304 686 aaPredicted RBP12.09□□□□□ -0.47
RPAIN-216ENST00000575599 MRGPRGQ86SM5 289 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 ANKRD46Q86W74 232 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 COX18Q8N8Q8 333 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 WDSUB1Q8N9V3 476 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 SLC16A11Q8NCK7 471 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 ANKK1Q8NFD2 765 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 OR56A1Q8NGH5 318 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 NEIL3Q8TAT5 605 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 ITLN2Q8WWU7 325 aaPredicted RBP12.09□□□□□ -0.47
RPAIN-216ENST00000575599 SARAFQ96BY9 339 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 VKORC1Q9BQB6 163 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 UBQLN3Q9H347 655 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 ACKR4Q9NPB9 350 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms