RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 ABCG2Q9UNQ0 655 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 MAPRE3Q9UPY8 281 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 PCDHGB3Q9Y5G1 929 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 CACNA1DQ01668 2161 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 MPDZO75970 2070 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 MYO9AB2RTY4 2548 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 TRGV5A0A0B4J1U4 118 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 GOLGA8QA0A0J9YX86 632 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 A0A1W2PRB8 838 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 GOLGA8OA6NCC3 632 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 CAPN14A8MX76 684 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 E9PBE3 544 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 NPIPA2E9PIF3 369 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 GOLGA8NF8WBI6 632 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 NPIPA3F8WFD2 350 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 RNASET2O00584 256 aaKnown RBP7.88□□□□□ -1.15
SMG6-216ENST00000575176 EMC8O43402 210 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 ZIC3O60481 467 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 OXSR1O95747 527 aaPredicted RBP7.88□□□□□ -1.15
SMG6-216ENST00000575176 TPOP07202 933 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 GLI4P10075 376 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 ABOP16442 354 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 BMP7P18075 431 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 LBPP18428 481 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 AGAP20933 346 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 PSMA4P25789 261 aaKnown RBP7.88□□□□□ -1.15
SMG6-216ENST00000575176 ELAVL4P26378 380 aaKnown RBP7.88□□□□□ -1.15
SMG6-216ENST00000575176 GDF1P27539 372 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 RPL3P39023 403 aaKnown RBP7.88□□□□□ -1.15
SMG6-216ENST00000575176 TRPC1P48995 793 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 LHX2P50458 406 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 MANFP55145 182 aaKnown RBP7.88□□□□□ -1.15
SMG6-216ENST00000575176 CLDN18P56856 261 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 NUP107P57740 925 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 RPS26P62854 115 aaKnown RBP7.88□□□□□ -1.15
SMG6-216ENST00000575176 PRR5P85299 388 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 MAD2L1Q13257 205 aaPredicted RBP7.88□□□□□ -1.15
SMG6-216ENST00000575176 EFR3AQ14156 821 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 LASP1Q14847 261 aaKnown RBP7.88□□□□□ -1.15
SMG6-216ENST00000575176 GXYLT1Q4G148 440 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 ACSF3Q4G176 576 aaPredicted RBP7.88□□□□□ -1.15
SMG6-216ENST00000575176 WIPI1Q5MNZ9 446 aaPredicted RBP7.88□□□□□ -1.15
SMG6-216ENST00000575176 CCNJQ5T5M9 372 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 CPTPQ5TA50 214 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 SAXO2Q658L1 398 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 ZNF787Q6DD87 383 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 CGB2Q6NT52 195 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 CDC73Q6P1J9 531 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 EPGNQ6UW88 154 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 RPTNQ6XPR3 784 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 OLIG3Q7RTU3 272 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 ULK2Q8IYT8 1036 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 OR5D16Q8NGK9 328 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 OR5M9Q8NGP3 310 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 OR9I1Q8NGQ6 314 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 OR4C3Q8NH37 302 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 OR5AK3PQ8NH89 298 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 PPP1R14CQ8TAE6 165 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 PIWIL2Q8TC59 973 aaKnown RBP7.88□□□□□ -1.15
SMG6-216ENST00000575176 MIPOL1Q8TD10 442 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 ACTRT2Q8TDY3 377 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 CDS1Q92903 461 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 RMND5BQ96G75 393 aaPredicted RBP7.88□□□□□ -1.15
SMG6-216ENST00000575176 MARK4Q96L34 752 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 CCDC115Q96NT0 180 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 STACQ99469 402 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 TIMP4Q99727 224 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 PAIP2Q9BPZ3 127 aaKnown RBP7.88□□□□□ -1.15
SMG6-216ENST00000575176 EBF4Q9BQW3 602 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 TP63Q9H3D4 680 aaPredicted RBP7.88□□□□□ -1.15
SMG6-216ENST00000575176 METTL7AQ9H8H3 244 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 SDR39U1Q9NRG7 319 aaPredicted RBP7.88□□□□□ -1.15
SMG6-216ENST00000575176 DUSP22Q9NRW4 184 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 ZCCHC3Q9NUD5 404 aaKnown RBP7.88□□□□□ -1.15
SMG6-216ENST00000575176 SLC6A5Q9Y345 797 aa7.88□□□□□ -1.15
SMG6-216ENST00000575176 A0A0G2JNJ9 132 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 TTC36A6NLP5 189 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 HMGB1P1B2RPK0 211 aaPredicted RBP7.87□□□□□ -1.15
SMG6-216ENST00000575176 ALG1L2C9J202 215 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 BCKDKO14874 412 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 SCO2O43819 266 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 BCAS1O75363 584 aaPredicted RBP7.87□□□□□ -1.15
SMG6-216ENST00000575176 REM1O75628 298 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 UTS2O95399 124 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 KITP10721 976 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 PRF1P14222 555 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 ACVR2AP27037 513 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 SRD5A2P31213 254 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 GABRA3P34903 492 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 DGKQP52824 942 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 RBPJQ06330 500 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 ART3Q13508 389 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 SLC10A1Q14973 349 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 LSM12Q3MHD2 195 aaKnown RBP7.87□□□□□ -1.15
SMG6-216ENST00000575176 FAM174BQ3ZCQ3 159 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 PDCD4Q53EL6 469 aaKnown RBP7.87□□□□□ -1.15
SMG6-216ENST00000575176 HEPHL1Q6MZM0 1159 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 ZCCHC12Q6PEW1 402 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 FIGNL1Q6PIW4 674 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 HDXQ7Z353 690 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms