RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 SIRPAP78324 504 aa13.72□□□□□ -0.21
CTNS-209ENST00000574776 NOXRED1Q6NXP6 359 aa13.72□□□□□ -0.21
CTNS-209ENST00000574776 TRIM46Q7Z4K8 759 aa13.72□□□□□ -0.21
CTNS-209ENST00000574776 IFT20Q8IY31 132 aa13.72□□□□□ -0.21
CTNS-209ENST00000574776 OR2L13Q8N349 312 aa13.72□□□□□ -0.21
CTNS-209ENST00000574776 MZB1Q8WU39 189 aa13.72□□□□□ -0.21
CTNS-209ENST00000574776 CCDC126Q96EE4 140 aa13.72□□□□□ -0.21
CTNS-209ENST00000574776 PINK1Q9BXM7 581 aa13.72□□□□□ -0.21
CTNS-209ENST00000574776 PTGES2Q9H7Z7 377 aa13.72□□□□□ -0.21
CTNS-209ENST00000574776 Q9N2J8 555 aa13.72□□□□□ -0.21
CTNS-209ENST00000574776 MYNNQ9NPC7 610 aa13.72□□□□□ -0.21
CTNS-209ENST00000574776 DDX18Q9NVP1 670 aaKnown RBP13.72□□□□□ -0.21
CTNS-209ENST00000574776 ABCG2Q9UNQ0 655 aa13.72□□□□□ -0.21
CTNS-209ENST00000574776 GXYLT2A0PJZ3 443 aa13.71□□□□□ -0.21
CTNS-209ENST00000574776 H3BML4 177 aa13.71□□□□□ -0.21
CTNS-209ENST00000574776 CTIFO43310 598 aaKnown RBP13.71□□□□□ -0.21
CTNS-209ENST00000574776 GMFGO60234 142 aa13.71□□□□□ -0.21
CTNS-209ENST00000574776 CRCPO75575 148 aa13.71□□□□□ -0.21
CTNS-209ENST00000574776 SLITRK5O94991 958 aa13.71□□□□□ -0.21
CTNS-209ENST00000574776 PSMG1O95456 288 aa13.71□□□□□ -0.21
CTNS-209ENST00000574776 IL33O95760 270 aa13.71□□□□□ -0.21
CTNS-209ENST00000574776 NTSP30990 170 aa13.71□□□□□ -0.21
CTNS-209ENST00000574776 GABRA3P34903 492 aa13.71□□□□□ -0.21
CTNS-209ENST00000574776 CLK3P49761 638 aaKnown RBP13.71□□□□□ -0.21
CTNS-209ENST00000574776 ZNHIT3Q15649 155 aaPredicted RBP13.71□□□□□ -0.21
CTNS-209ENST00000574776 ZYG11AQ6WRX3 759 aa13.71□□□□□ -0.21
CTNS-209ENST00000574776 BIVMQ86UB2 503 aa13.71□□□□□ -0.21
CTNS-209ENST00000574776 CXorf67Q86X51 503 aaPredicted RBP13.71□□□□□ -0.21
CTNS-209ENST00000574776 KRTAP1-3Q8IUG1 177 aa13.71□□□□□ -0.21
CTNS-209ENST00000574776 ZNF610Q8N9Z0 462 aa13.71□□□□□ -0.21
CTNS-209ENST00000574776 FAM76AQ8TAV0 307 aa13.71□□□□□ -0.21
CTNS-209ENST00000574776 FNDC9Q8TBE3 224 aa13.71□□□□□ -0.21
CTNS-209ENST00000574776 C1GALT1C1Q96EU7 318 aa13.71□□□□□ -0.21
CTNS-209ENST00000574776 ZNF845Q96IR2 970 aaPredicted RBP13.71□□□□□ -0.21
CTNS-209ENST00000574776 C18orf12Q96KH6 178 aa13.71□□□□□ -0.21
CTNS-209ENST00000574776 EGLN2Q96KS0 407 aa13.71□□□□□ -0.21
CTNS-209ENST00000574776 PIGQQ9BRB3 760 aa13.71□□□□□ -0.21
CTNS-209ENST00000574776 LMF2Q9BU23 707 aaKnown RBP13.71□□□□□ -0.21
CTNS-209ENST00000574776 TNFRSF12AQ9NP84 129 aa13.71□□□□□ -0.21
CTNS-209ENST00000574776 RRAGDQ9NQL2 400 aaPredicted RBP13.71□□□□□ -0.21
CTNS-209ENST00000574776 FAM120CQ9NX05 1096 aaKnown RBP13.71□□□□□ -0.21
CTNS-209ENST00000574776 PSMC3IPQ9P2W1 217 aaPredicted RBP13.71□□□□□ -0.21
CTNS-209ENST00000574776 MRTO4Q9UKD2 239 aaKnown RBP13.71□□□□□ -0.21
CTNS-209ENST00000574776 WBP11Q9Y2W2 641 aaKnown RBP13.71□□□□□ -0.21
CTNS-209ENST00000574776 ARID1AO14497 2285 aa13.71□□□□□ -0.21
CTNS-209ENST00000574776 DEFB108AA8MXU0 73 aa13.7□□□□□ -0.22
CTNS-209ENST00000574776 LINC01387J3KSC0 135 aa13.7□□□□□ -0.22
CTNS-209ENST00000574776 SIAH2O43255 324 aa13.7□□□□□ -0.22
CTNS-209ENST00000574776 SEC22BO75396 215 aa13.7□□□□□ -0.22
CTNS-209ENST00000574776 UTS2O95399 124 aa13.7□□□□□ -0.22
CTNS-209ENST00000574776 CGAP01215 116 aa13.7□□□□□ -0.22
CTNS-209ENST00000574776 POU2F1P14859 743 aa13.7□□□□□ -0.22
CTNS-209ENST00000574776 UGT2B10P36537 528 aa13.7□□□□□ -0.22
CTNS-209ENST00000574776 KCNJ5P48544 419 aa13.7□□□□□ -0.22
CTNS-209ENST00000574776 PCYT1AP49585 367 aa13.7□□□□□ -0.22
CTNS-209ENST00000574776 GANABQ14697 944 aaKnown RBP13.7□□□□□ -0.22
CTNS-209ENST00000574776 PON3Q15166 354 aa13.7□□□□□ -0.22
CTNS-209ENST00000574776 CFAP157Q5JU67 520 aa13.7□□□□□ -0.22
CTNS-209ENST00000574776 APOOLQ6UXV4 268 aa13.7□□□□□ -0.22
CTNS-209ENST00000574776 ZNF551Q7Z340 670 aaPredicted RBP13.7□□□□□ -0.22
CTNS-209ENST00000574776 EXOC3L1Q86VI1 746 aa13.7□□□□□ -0.22
CTNS-209ENST00000574776 PIK3R3Q92569 461 aa13.7□□□□□ -0.22
CTNS-209ENST00000574776 GFM2Q969S9 779 aaKnown RBP13.7□□□□□ -0.22
CTNS-209ENST00000574776 PIK3IP1Q96FE7 263 aa13.7□□□□□ -0.22
CTNS-209ENST00000574776 SLC39A3Q9BRY0 314 aa13.7□□□□□ -0.22
CTNS-209ENST00000574776 MED18Q9BUE0 208 aa13.7□□□□□ -0.22
CTNS-209ENST00000574776 TXLNGYQ9BZA5 131 aa13.7□□□□□ -0.22
CTNS-209ENST00000574776 RNF122Q9H9V4 155 aa13.7□□□□□ -0.22
CTNS-209ENST00000574776 EQTNQ9NQ60 294 aa13.7□□□□□ -0.22
CTNS-209ENST00000574776 ELOVL5Q9NYP7 299 aa13.7□□□□□ -0.22
CTNS-209ENST00000574776 ZNF226Q9NYT6 803 aa13.7□□□□□ -0.22
CTNS-209ENST00000574776 SHISA8B8ZZ34 492 aa13.69□□□□□ -0.22
CTNS-209ENST00000574776 C16orf97H3BN30 126 aa13.69□□□□□ -0.22
CTNS-209ENST00000574776 EMC8O43402 210 aa13.69□□□□□ -0.22
CTNS-209ENST00000574776 RSL1D1O76021 490 aaKnown RBP13.69□□□□□ -0.22
CTNS-209ENST00000574776 ANGPTL1O95841 491 aa13.69□□□□□ -0.22
CTNS-209ENST00000574776 IGKV1D-16P01601 117 aa13.69□□□□□ -0.22
CTNS-209ENST00000574776 PROCP04070 461 aa13.69□□□□□ -0.22
CTNS-209ENST00000574776 INHBBP09529 407 aa13.69□□□□□ -0.22
CTNS-209ENST00000574776 ADSLP30566 484 aaPredicted RBP13.69□□□□□ -0.22
CTNS-209ENST00000574776 PSMD4P55036 377 aaKnown RBP13.69□□□□□ -0.22
CTNS-209ENST00000574776 LTBQ06643 244 aa13.69□□□□□ -0.22
CTNS-209ENST00000574776 C17orf67Q0P5P2 114 aa13.69□□□□□ -0.22
CTNS-209ENST00000574776 HSPB3Q12988 150 aa13.69□□□□□ -0.22
CTNS-209ENST00000574776 KIAA0040Q15053 153 aa13.69□□□□□ -0.22
CTNS-209ENST00000574776 SGCBQ16585 318 aa13.69□□□□□ -0.22
CTNS-209ENST00000574776 GRAMD1BQ3KR37 738 aa13.69□□□□□ -0.22
CTNS-209ENST00000574776 GLYR1Q49A26 553 aaPredicted RBP13.69□□□□□ -0.22
CTNS-209ENST00000574776 SHEQ5VZ18 495 aa13.69□□□□□ -0.22
CTNS-209ENST00000574776 ANKRD34AQ69YU3 496 aa13.69□□□□□ -0.22
CTNS-209ENST00000574776 ANKRD26P1Q6NSI1 321 aa13.69□□□□□ -0.22
CTNS-209ENST00000574776 FRMD7Q6ZUT3 714 aa13.69□□□□□ -0.22
CTNS-209ENST00000574776 SH2D5Q6ZV89 423 aa13.69□□□□□ -0.22
CTNS-209ENST00000574776 ZNF550Q7Z398 422 aa13.69□□□□□ -0.22
CTNS-209ENST00000574776 GPR151Q8TDV0 419 aa13.69□□□□□ -0.22
CTNS-209ENST00000574776 ZC3HAV1LQ96H79 300 aaKnown RBP13.69□□□□□ -0.22
CTNS-209ENST00000574776 RHOXF2Q9BQY4 288 aa13.69□□□□□ -0.22
CTNS-209ENST00000574776 TBL1XR1Q9BZK7 514 aa13.69□□□□□ -0.22
CTNS-209ENST00000574776 C12orf65Q9H3J6 166 aaKnown RBP13.69□□□□□ -0.22
CTNS-209ENST00000574776 C3orf14Q9HBI5 128 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms