RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 AZIN1O14977 448 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 AKAP10O43572 662 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 CRCPO75575 148 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 SLITRK5O94991 958 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 UTS2O95399 124 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 HRGP04196 525 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 LINC00032P0C843 101 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 HK1P19367 917 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 EFNA1P20827 205 aaPredicted RBP16.34■□□□□ 0.21
CHD3-214ENST00000572579 GCKP35557 465 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 FRKP42685 505 aaPredicted RBP16.34■□□□□ 0.21
CHD3-214ENST00000572579 KIR2DL2P43627 348 aaPredicted RBP16.34■□□□□ 0.21
CHD3-214ENST00000572579 CLDN20P56880 219 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 NAA20P61599 178 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 HSPB3Q12988 150 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 PDE7AQ13946 482 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 TMEM44Q2T9K0 475 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 KANK2Q63ZY3 851 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 ZNF474Q6S9Z5 364 aaPredicted RBP16.34■□□□□ 0.21
CHD3-214ENST00000572579 BTLAQ7Z6A9 289 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 GALNT10Q86SR1 603 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 KIF18BQ86Y91 864 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 CLHC1Q8NHS4 586 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 C1GALT1C1Q96EU7 318 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 RMND5BQ96G75 393 aaPredicted RBP16.34■□□□□ 0.21
CHD3-214ENST00000572579 ZNF845Q96IR2 970 aaPredicted RBP16.34■□□□□ 0.21
CHD3-214ENST00000572579 ZFP3Q96NJ6 502 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 TSSK3Q96PN8 268 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 ANKZF1Q9H8Y5 726 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 FBXO34Q9NWN3 711 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 FAM120CQ9NX05 1096 aaKnown RBP16.34■□□□□ 0.21
CHD3-214ENST00000572579 NTMQ9P121 344 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 GIMAP2Q9UG22 337 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 FIS1Q9Y3D6 152 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 PCNX3Q9H6A9 2034 aa16.33■□□□□ 0.21
CHD3-214ENST00000572579 IGLV3-32A0A0A0MS00 114 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 OR2M5A3KFT3 312 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 SLC28A1O00337 649 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 LSM1O15116 133 aaKnown RBP16.33■□□□□ 0.2
CHD3-214ENST00000572579 SIAH2O43255 324 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 TBX19O60806 448 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 ATE1O95260 518 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 CGAP01215 116 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 ALDH3A1P30838 453 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 NTSP30990 170 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 RFX3P48380 749 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 FAM27E3Q08E93 113 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 DECR1Q16698 335 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 GRAMD1BQ3KR37 738 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 EXOSC6Q5RKV6 272 aaKnown RBP16.33■□□□□ 0.2
CHD3-214ENST00000572579 VWA1Q6PCB0 445 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 RNF165Q6ZSG1 346 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 C22orf34Q6ZV56 151 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 TGIF2LYQ8IUE0 185 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 GRAMD2AQ8IUY3 354 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 UBQLNLQ8IYU4 475 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 BANPQ8N9N5 519 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 CCDC63Q8NA47 563 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 OR4C3Q8NH37 302 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 FAM110BQ8TC76 370 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 LRRC46Q96FV0 321 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 C16orf58Q96GQ5 468 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 METTL2AQ96IZ6 378 aaKnown RBP16.33■□□□□ 0.2
CHD3-214ENST00000572579 MECRQ9BV79 373 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 EQTNQ9NQ60 294 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 SLC17A7Q9P2U7 560 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 ABCG2Q9UNQ0 655 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 MED12LQ86YW9 2145 aa16.33■□□□□ 0.2
CHD3-214ENST00000572579 TRIM13O60858 407 aa16.32■□□□□ 0.2
CHD3-214ENST00000572579 NKX2-2O95096 273 aa16.32■□□□□ 0.2
CHD3-214ENST00000572579 IFI6P09912 130 aa16.32■□□□□ 0.2
CHD3-214ENST00000572579 ACP2P11117 423 aa16.32■□□□□ 0.2
CHD3-214ENST00000572579 CREB1P16220 341 aa16.32■□□□□ 0.2
CHD3-214ENST00000572579 MRPS22P82650 360 aaKnown RBP16.32■□□□□ 0.2
CHD3-214ENST00000572579 POU4F3Q15319 338 aa16.32■□□□□ 0.2
CHD3-214ENST00000572579 ARL13AQ5H913 290 aaPredicted RBP16.32■□□□□ 0.2
CHD3-214ENST00000572579 PAMR1Q6UXH9 720 aa16.32■□□□□ 0.2
CHD3-214ENST00000572579 SLC16A11Q8NCK7 471 aa16.32■□□□□ 0.2
CHD3-214ENST00000572579 GOT1L1Q8NHS2 421 aaPredicted RBP16.32■□□□□ 0.2
CHD3-214ENST00000572579 ZNF764Q96H86 408 aaPredicted RBP16.32■□□□□ 0.2
CHD3-214ENST00000572579 DACH2Q96NX9 599 aa16.32■□□□□ 0.2
CHD3-214ENST00000572579 CCT7Q99832 543 aa16.32■□□□□ 0.2
CHD3-214ENST00000572579 REEP4Q9H6H4 257 aa16.32■□□□□ 0.2
CHD3-214ENST00000572579 Q9N2J8 555 aa16.32■□□□□ 0.2
CHD3-214ENST00000572579 SIRT3Q9NTG7 399 aaPredicted RBP16.32■□□□□ 0.2
CHD3-214ENST00000572579 PDPK1O15530 556 aa16.31■□□□□ 0.2
CHD3-214ENST00000572579 GMFGO60234 142 aa16.31■□□□□ 0.2
CHD3-214ENST00000572579 DIAPH2O60879 1101 aa16.31■□□□□ 0.2
CHD3-214ENST00000572579 ANGPTL1O95841 491 aa16.31■□□□□ 0.2
CHD3-214ENST00000572579 FGF4P08620 206 aa16.31■□□□□ 0.2
CHD3-214ENST00000572579 PRPS2P11908 318 aa16.31■□□□□ 0.2
CHD3-214ENST00000572579 BCKDHAP12694 445 aa16.31■□□□□ 0.2
CHD3-214ENST00000572579 PEPDP12955 493 aa16.31■□□□□ 0.2
CHD3-214ENST00000572579 CD99P14209 185 aa16.31■□□□□ 0.2
CHD3-214ENST00000572579 ADAM8P78325 824 aa16.31■□□□□ 0.2
CHD3-214ENST00000572579 PRR5P85299 388 aa16.31■□□□□ 0.2
CHD3-214ENST00000572579 GUSBP1Q15486 140 aa16.31■□□□□ 0.2
CHD3-214ENST00000572579 RAET1LQ5VY80 246 aa16.31■□□□□ 0.2
CHD3-214ENST00000572579 TRABD2AQ86V40 505 aa16.31■□□□□ 0.2
CHD3-214ENST00000572579 CNPY4Q8N129 248 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms