RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 PCDHB1Q9Y5F3 818 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 PLSCR5A0PG75 271 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 ARHGEF33A8MVX0 844 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 PHGDHO43175 533 aaKnown RBP6.25□□□□□ -1.41
SMG1-217ENST00000569764 RAD1O60671 282 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 ALDOAP04075 364 aaKnown RBP6.25□□□□□ -1.41
SMG1-217ENST00000569764 FCGR1AP12314 374 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 MYF6P23409 242 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 TEAD1P28347 426 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 IL12BP29460 328 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 GMPRP36959 345 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 RBM34P42696 430 aaKnown RBP6.25□□□□□ -1.41
SMG1-217ENST00000569764 GATA4P43694 442 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 NUMBP49757 651 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 SHC2P98077 582 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 CDK16Q00536 496 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 IL9RQ01113 521 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 KCNJ8Q15842 424 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 LIN52Q52LA3 116 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 CPZQ66K79 652 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 ARSKQ6UWY0 536 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 GDPD3Q7L5L3 318 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 SVOPQ8N4V2 548 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 CYB561A3Q8NBI2 242 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 TMEM178AQ8NBL3 297 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 CFHR4Q92496 578 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 NEIL1Q96FI4 390 aaPredicted RBP6.25□□□□□ -1.41
SMG1-217ENST00000569764 HSH2DQ96JZ2 352 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 OR2B2Q9GZK3 357 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 MEAF6Q9HAF1 191 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 SIAEQ9HAT2 523 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 SLC17A6Q9P2U8 582 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 NEU3Q9UQ49 428 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 SNX11Q9Y5W9 270 aa6.25□□□□□ -1.41
SMG1-217ENST00000569764 MAP1BP46821 2468 aaKnown RBP6.24□□□□□ -1.41
SMG1-217ENST00000569764 IGLON5A6NGN9 336 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 LRRN3E7EW58 273 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 OR7A10O76100 309 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 TK1P04183 234 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 B4GALT1P15291 398 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 ACADSP16219 412 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 ITGA3P26006 1051 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 KCNJ11Q14654 390 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 IER5LQ5T953 404 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 PEAR1Q5VY43 1037 aaPredicted RBP6.24□□□□□ -1.41
SMG1-217ENST00000569764 CST9LP1Q5W188 147 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 TMEM92Q6UXU6 159 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 DPY19L3Q6ZPD9 716 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 DMRTC2Q8IXT2 367 aaPredicted RBP6.24□□□□□ -1.41
SMG1-217ENST00000569764 MICU2Q8IYU8 434 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 ZBED8Q8IZ13 594 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 CDK20Q8IZL9 346 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 OR4D10Q8NGI6 311 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 PYROXD1Q8WU10 500 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 NAT14Q8WUY8 206 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 ELP4Q96EB1 424 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 TUBB6Q9BUF5 446 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 PCDHAC1Q9H158 963 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 HAO1Q9UJM8 370 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 TESMINQ9Y4I5 508 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 DOCK4Q8N1I0 1966 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 TEX13CA0A0J9YWL9 993 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 GLYATL1P3A0A0U1RQE8 302 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 CXorf49A8MYA2 514 aaPredicted RBP6.24□□□□□ -1.41
SMG1-217ENST00000569764 E7EQ34 232 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 TOX3O15405 576 aaPredicted RBP6.24□□□□□ -1.41
SMG1-217ENST00000569764 MFSD11O43934 449 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 SDC3O75056 442 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 NXPH2O95156 264 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 SERPIND1P05546 499 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 CHRM2P08172 466 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 CCNB1P14635 433 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 NME1P15531 152 aaKnown RBP6.24□□□□□ -1.41
SMG1-217ENST00000569764 ATP6V1B2P21281 511 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 PPP2R1BP30154 601 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 COMPP49747 757 aaPredicted RBP6.24□□□□□ -1.41
SMG1-217ENST00000569764 DBPQ10586 325 aaPredicted RBP6.24□□□□□ -1.41
SMG1-217ENST00000569764 CDH17Q12864 832 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 KLRB1Q12918 225 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 SEMA3BQ13214 749 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 DEFB133Q30KQ1 61 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 KHDC1LQ5JSQ8 128 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 PDSS1Q5T2R2 415 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 PLEKHG7Q6ZR37 379 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 TMPRSS7Q7RTY8 843 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 CRIPAKQ8N1N5 446 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 STEAP2Q8NFT2 490 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 OR4K14Q8NGD5 310 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 OR10J5Q8NHC4 309 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 MZB1Q8WU39 189 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 MITD1Q8WV92 249 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 FOXRED1Q96CU9 486 aaPredicted RBP6.24□□□□□ -1.41
SMG1-217ENST00000569764 CPNE2Q96FN4 548 aaPredicted RBP6.24□□□□□ -1.41
SMG1-217ENST00000569764 MED8Q96G25 268 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 SNX22Q96L94 193 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 CCT8L2Q96SF2 557 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 MAP3K3Q99759 626 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 TMEM109Q9BVC6 243 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 METTL9Q9H1A3 318 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 PRDM9Q9NQV7 894 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms