RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.16□□□□□ -0.62
SF3B3-208ENST00000567250 EVPLLA8MZ36 301 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 G3V3Y1 287 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 SCDO00767 359 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 STX11O75558 287 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 UTS2O95399 124 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 NPPAP01160 153 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 OR12D1P0DN82 309 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 EDN3P14138 238 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 PTPN6P29350 595 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 CRATP43155 626 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 CYLC2Q14093 348 aaPredicted RBP11.15□□□□□ -0.62
SF3B3-208ENST00000567250 ELOAQ14241 798 aaKnown RBP11.15□□□□□ -0.62
SF3B3-208ENST00000567250 TRMT5Q32P41 509 aaKnown RBP11.15□□□□□ -0.62
SF3B3-208ENST00000567250 ARHGAP11BQ3KRB8 267 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 GTDC1Q4AE62 458 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 FLYWCH1Q4VC44 716 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 PRR30Q53SZ7 412 aaPredicted RBP11.15□□□□□ -0.62
SF3B3-208ENST00000567250 PAGE3Q5JUK9 113 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 CCNJQ5T5M9 372 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 HEPHL1Q6MZM0 1159 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 FIGNL1Q6PIW4 674 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 MTDHQ86UE4 582 aaKnown RBP11.15□□□□□ -0.62
SF3B3-208ENST00000567250 SNX32Q86XE0 403 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 FAM109AQ8N4B1 249 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 ANKS4BQ8N8V4 417 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 RP9Q8TA86 221 aaKnown RBP11.15□□□□□ -0.62
SF3B3-208ENST00000567250 FAM110BQ8TC76 370 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 PNPT1Q8TCS8 783 aaKnown RBP11.15□□□□□ -0.62
SF3B3-208ENST00000567250 XAGE5Q8WWM1 108 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 AURKBQ96GD4 344 aaPredicted RBP11.15□□□□□ -0.62
SF3B3-208ENST00000567250 JSRP1Q96MG2 331 aaPredicted RBP11.15□□□□□ -0.62
SF3B3-208ENST00000567250 CCT8L2Q96SF2 557 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 SLX1AQ9BQ83 275 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 TTTY12Q9BZ98 90 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 SERHL2Q9H4I8 314 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 ZFP64Q9NPA5 681 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 UBQLN4Q9NRR5 601 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 ASF1BQ9NVP2 202 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 QPCTLQ9NXS2 382 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 TUBA8Q9NY65 449 aaPredicted RBP11.15□□□□□ -0.62
SF3B3-208ENST00000567250 CALML5Q9NZT1 146 aa11.15□□□□□ -0.62
SF3B3-208ENST00000567250 SMG1Q96Q15 3661 aaKnown RBP11.15□□□□□ -0.62
SF3B3-208ENST00000567250 A0A0G2JMM0 328 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 A0A1W2PPB8 328 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 A0A1W2PRS3 328 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 KIR3DP1A8MWS1 328 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 H3BNH8 94 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 CLIC1O00299 241 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 HMGN4O00479 90 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 MRASO14807 208 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 SNPHO15079 494 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 SCO2O43819 266 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 TRIM3O75382 744 aaPredicted RBP11.14□□□□□ -0.63
SF3B3-208ENST00000567250 IGKV1D-16P01601 117 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 GUSBP08236 651 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 HOXB9P17482 250 aaPredicted RBP11.14□□□□□ -0.63
SF3B3-208ENST00000567250 ENDOUP21128 410 aaKnown RBP11.14□□□□□ -0.63
SF3B3-208ENST00000567250 DCTP40126 519 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 DSTNP60981 165 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 PPIAP62937 165 aaKnown RBP11.14□□□□□ -0.63
SF3B3-208ENST00000567250 HYAL4Q2M3T9 481 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 GRAMD1BQ3KR37 738 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 GPAT3Q53EU6 434 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.14□□□□□ -0.63
SF3B3-208ENST00000567250 BICRALQ6AI39 1079 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 PIGWQ7Z7B1 504 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 MISPQ8IVT2 679 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 OR1J4Q8NGS1 313 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 RNF138Q8WVD3 245 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 ROPN1LQ96C74 230 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 CMTM5Q96DZ9 223 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 LRRC37BQ96QE4 947 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 SDF2Q99470 211 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 CGREF1Q99674 301 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 BARD1Q99728 777 aaKnown RBP11.14□□□□□ -0.63
SF3B3-208ENST00000567250 ZNF350Q9GZX5 532 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 ZNF703Q9H7S9 590 aaPredicted RBP11.14□□□□□ -0.63
SF3B3-208ENST00000567250 CACYBPQ9HB71 228 aaKnown RBP11.14□□□□□ -0.63
SF3B3-208ENST00000567250 SLC6A13Q9NSD5 602 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 GID8Q9NWU2 228 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 VAPAQ9P0L0 249 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 PPP4R1LQ9P1A2 415 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 ARMCX1Q9P291 453 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 NTNG1Q9Y2I2 539 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 WDR45Q9Y484 360 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 GMEB1Q9Y692 573 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 SHANK1Q9Y566 2161 aa11.14□□□□□ -0.63
SF3B3-208ENST00000567250 ZNF462Q96JM2 2506 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 TRBV5-3A0A0A0MS03 114 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 C15orf38-AP3S2A0A0A6YYH1 394 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 A0A1W2PQD3 144 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 ALG1L2C9J202 215 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 KIAA0513O60268 411 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 FADS1O60427 444 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 GLSO94925 669 aaPredicted RBP11.13□□□□□ -0.63
SF3B3-208ENST00000567250 OXSR1O95747 527 aaPredicted RBP11.13□□□□□ -0.63
SF3B3-208ENST00000567250 NR2F1P10589 423 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 TBXA2RP21731 343 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 GDF1P27539 372 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms