RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 BATF3Q9NR55 127 aa9.9□□□□□ -0.82
UBFD1-205ENST00000566136 ATXN10Q9UBB4 475 aa9.9□□□□□ -0.82
UBFD1-205ENST00000566136 RAPGEFL1Q9UHV5 662 aa9.9□□□□□ -0.82
UBFD1-205ENST00000566136 POMPQ9Y244 141 aa9.9□□□□□ -0.82
UBFD1-205ENST00000566136 LSM4Q9Y4Z0 139 aaKnown RBP9.9□□□□□ -0.82
UBFD1-205ENST00000566136 ATG2AQ2TAZ0 1938 aa9.9□□□□□ -0.82
UBFD1-205ENST00000566136 OR5K4A6NMS3 321 aa9.9□□□□□ -0.83
UBFD1-205ENST00000566136 A8MT66 165 aa9.9□□□□□ -0.83
UBFD1-205ENST00000566136 C9orf172C9J069 976 aa9.9□□□□□ -0.83
UBFD1-205ENST00000566136 RAD51BO15315 384 aa9.9□□□□□ -0.83
UBFD1-205ENST00000566136 HEXAP06865 529 aa9.9□□□□□ -0.83
UBFD1-205ENST00000566136 PRSS56P0CW18 603 aa9.9□□□□□ -0.83
UBFD1-205ENST00000566136 CLCN5P51795 746 aa9.9□□□□□ -0.83
UBFD1-205ENST00000566136 RAE1P78406 368 aaKnown RBP9.9□□□□□ -0.83
UBFD1-205ENST00000566136 ZNF235Q14590 738 aa9.9□□□□□ -0.83
UBFD1-205ENST00000566136 RAET1LQ5VY80 246 aa9.9□□□□□ -0.83
UBFD1-205ENST00000566136 METTL21CQ5VZV1 264 aa9.9□□□□□ -0.83
UBFD1-205ENST00000566136 PLCXD3Q63HM9 321 aa9.9□□□□□ -0.83
UBFD1-205ENST00000566136 C1orf94Q6P1W5 598 aa9.9□□□□□ -0.83
UBFD1-205ENST00000566136 LAX1Q8IWV1 398 aa9.9□□□□□ -0.83
UBFD1-205ENST00000566136 TEX26Q8N6G2 289 aa9.9□□□□□ -0.83
UBFD1-205ENST00000566136 C11orf65Q8NCR3 313 aa9.9□□□□□ -0.83
UBFD1-205ENST00000566136 TRPV3Q8NET8 790 aa9.9□□□□□ -0.83
UBFD1-205ENST00000566136 OR13C4Q8NGS5 318 aa9.9□□□□□ -0.83
UBFD1-205ENST00000566136 RAB1CQ92928 201 aa9.9□□□□□ -0.83
UBFD1-205ENST00000566136 RIMS4Q9H426 269 aaPredicted RBP9.9□□□□□ -0.83
UBFD1-205ENST00000566136 ALG9Q9H6U8 611 aa9.9□□□□□ -0.83
UBFD1-205ENST00000566136 FAM92AA1XBS5 289 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 MROH6A6NGR9 719 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 DRGXA6NNA5 263 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 CFLARO15519 480 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 LDB2O43679 373 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 BRI3O95415 125 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 CD22P20273 847 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 TRIM23P36406 574 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 PKNOX1P55347 436 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 CSNK2A1P68400 391 aaPredicted RBP9.89□□□□□ -0.83
UBFD1-205ENST00000566136 SIM1P81133 766 aaPredicted RBP9.89□□□□□ -0.83
UBFD1-205ENST00000566136 SULT2A1Q06520 285 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 IL10RBQ08334 325 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 MEPCEQ7L2J0 689 aaKnown RBP9.89□□□□□ -0.83
UBFD1-205ENST00000566136 RYBPQ8N488 228 aaPredicted RBP9.89□□□□□ -0.83
UBFD1-205ENST00000566136 CSNK2A3Q8NEV1 391 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 COQ10AQ96MF6 247 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 SMIM14Q96QK8 99 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 RANBP9Q96S59 729 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 ZNF184Q99676 751 aaPredicted RBP9.89□□□□□ -0.83
UBFD1-205ENST00000566136 ANKRD60Q9BZ19 345 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 PHPT1Q9NRX4 125 aaPredicted RBP9.89□□□□□ -0.83
UBFD1-205ENST00000566136 VWA7Q9Y334 891 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 KIAA1671Q9BY89 1806 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 ZC3H12DA2A288 527 aaKnown RBP9.89□□□□□ -0.83
UBFD1-205ENST00000566136 ANKRD30BLA7E2S9 258 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 ZNF701M0R085 212 aaPredicted RBP9.89□□□□□ -0.83
UBFD1-205ENST00000566136 PRAMEF11O60813 436 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 MYO1DO94832 1006 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 GOT2P00505 430 aaKnown RBP9.89□□□□□ -0.83
UBFD1-205ENST00000566136 IGLV3-27P01718 113 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 RD3LP0DJH9 198 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 THRAP10827 490 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 ENO3P13929 434 aaPredicted RBP9.89□□□□□ -0.83
UBFD1-205ENST00000566136 ATF6P18850 670 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 HYAL1Q12794 435 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 GPR17Q13304 367 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 TRIP10Q15642 601 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 LPCAT4Q643R3 524 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 FIGLAQ6QHK4 219 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 KCTD8Q6ZWB6 473 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 IGFN1Q86VF2 1251 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 SIAH3Q8IW03 269 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 BOLLQ8N9W6 283 aaKnown RBP9.89□□□□□ -0.83
UBFD1-205ENST00000566136 MSI2Q96DH6 328 aaKnown RBP9.89□□□□□ -0.83
UBFD1-205ENST00000566136 APOLD1Q96LR9 279 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 FYTTD1Q96QD9 318 aaKnown RBP9.89□□□□□ -0.83
UBFD1-205ENST00000566136 CHRDL1Q9BU40 450 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 MFSD1Q9H3U5 465 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 WDR76Q9H967 626 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 ARL15Q9NXU5 204 aa9.89□□□□□ -0.83
UBFD1-205ENST00000566136 LOC285095A0A1B0GVY8 99 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 A0A1W2PPV4 95 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 F5H5T6 163 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 FKBP6O75344 327 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 FCGR2AP12318 317 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 STK19P49842 368 aaPredicted RBP9.88□□□□□ -0.83
UBFD1-205ENST00000566136 KPNA2P52292 529 aaKnown RBP9.88□□□□□ -0.83
UBFD1-205ENST00000566136 RPS24P62847 133 aaKnown RBP9.88□□□□□ -0.83
UBFD1-205ENST00000566136 DLX2Q07687 328 aaPredicted RBP9.88□□□□□ -0.83
UBFD1-205ENST00000566136 KLC1Q07866 573 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 PPP1R3AQ16821 1122 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 FAM214AQ32MH5 1076 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 PARP15Q460N3 678 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 THEM4Q5T1C6 240 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 KCNIP4Q6PIL6 250 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 PIWIL4Q7Z3Z4 852 aaKnown RBP9.88□□□□□ -0.83
UBFD1-205ENST00000566136 NUP43Q8NFH3 380 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 TADA1Q96BN2 335 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 NSMCE3Q96MG7 304 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 ZNF768Q9H5H4 540 aaKnown RBP9.88□□□□□ -0.83
UBFD1-205ENST00000566136 ZNF385DQ9H6B1 395 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 PTTG2Q9NZH5 202 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms