RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 LINC01549A6NIU2 74 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 H3BN98 237 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 SLC19A2O60779 497 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 GLSO94925 669 aaPredicted RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 TSPAN12O95859 305 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 VIPP01282 170 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 RETP07949 1114 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 ADH4P08319 380 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 POU2F2P09086 479 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 ZNF23P17027 643 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 ALOX12P18054 663 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 RPL6Q02878 288 aaKnown RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 SLC35F1Q5T1Q4 408 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 CCDC28AQ8IWP9 274 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 SLC39A11Q8N1S5 342 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 MRPL43Q8N983 215 aaKnown RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 THAP3Q8WTV1 239 aaPredicted RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 TMEM27Q9HBJ8 222 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 TAC3Q9UHF0 121 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 PLXNA3P51805 1871 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 PTPRDP23468 1912 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 LOC285095A0A1B0GVY8 99 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 CBY3A6NI87 242 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 PGLSO95336 258 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 PDGFBP01127 241 aaPredicted RBP3.16□□□□□ -1.9
CHD9-213ENST00000564845 S100PP25815 95 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 PKLRP30613 574 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 SLC9A3P48764 834 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 UCNP55089 124 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 S100A12P80511 92 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 PROX2Q3B8N5 592 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 OLFML2AQ68BL7 652 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 NUP54Q7Z3B4 507 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 AMIGO1Q86WK6 493 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 B4GALNT2Q8NHY0 566 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 SLC9A6Q92581 669 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 MYADMQ96S97 322 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 TAPBPLQ9BX59 468 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 NLE1Q9NVX2 485 aaPredicted RBP3.16□□□□□ -1.9
CHD9-213ENST00000564845 IFNL4K9M1U5 179 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 LCMT2O60294 686 aaKnown RBP3.16□□□□□ -1.9
CHD9-213ENST00000564845 RENP00797 406 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 EGFP01133 1207 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 CCNYL3P0C7X3 344 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 ZFP36L2P47974 494 aaKnown RBP3.16□□□□□ -1.9
CHD9-213ENST00000564845 EPHA4P54764 986 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 PPP2CBP62714 309 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 PPP2CAP67775 309 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 ST3GAL4Q11206 333 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 SLC25A24Q6NUK1 477 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 SLC29A4Q7RTT9 530 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 PXKQ7Z7A4 578 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 GPR149Q86SP6 731 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 CCDC71LQ8N9Z2 235 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 NLGN4YQ8NFZ3 816 aaPredicted RBP3.16□□□□□ -1.9
CHD9-213ENST00000564845 SPANXCQ9NY87 97 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 ABCG2Q9UNQ0 655 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 CACNG2Q9Y698 323 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 KIF26AQ9ULI4 1882 aaPredicted RBP3.16□□□□□ -1.9
CHD9-213ENST00000564845 OR6C74A6NCV1 312 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 MROH6A6NGR9 719 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 SCDO00767 359 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 SSX5O60225 188 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 LDB3O75112 727 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 STK16O75716 305 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 ANGPTL1O95841 491 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 PPP3CBP16298 524 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 IL1RNP18510 177 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 EPORP19235 508 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 GALP22466 123 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 TNFAIP8L2Q6P589 184 aaPredicted RBP3.16□□□□□ -1.9
CHD9-213ENST00000564845 DCDC5Q6ZRR9 648 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 ZNF551Q7Z340 670 aaPredicted RBP3.16□□□□□ -1.9
CHD9-213ENST00000564845 KMT5CQ86Y97 462 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 MARVELD2Q8N4S9 558 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 ATP6V1C2Q8NEY4 427 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 OR4E2Q8NGC2 313 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 SPRYD4Q8WW59 207 aaPredicted RBP3.16□□□□□ -1.9
CHD9-213ENST00000564845 SELENOMQ8WWX9 145 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 PDXPQ96GD0 296 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 UQCC2Q9BRT2 126 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 MKKSQ9NPJ1 570 aaPredicted RBP3.16□□□□□ -1.9
CHD9-213ENST00000564845 EBF1Q9UH73 591 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 POLR1DQ9Y2S0 133 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 TRAPPC13A5PLN9 417 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 H0YAE9 185 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 OR2T1O43869 369 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 RAP2AP10114 183 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 COL9A1P20849 921 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 ACRV1P26436 265 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 CST5P28325 142 aaPredicted RBP3.16□□□□□ -1.9
CHD9-213ENST00000564845 IL12BP29460 328 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 GNPDA1P46926 289 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 RPS13P62277 151 aaKnown RBP3.16□□□□□ -1.9
CHD9-213ENST00000564845 RPS21P63220 83 aaKnown RBP3.16□□□□□ -1.9
CHD9-213ENST00000564845 TMEM115Q12893 351 aaPredicted RBP3.16□□□□□ -1.9
CHD9-213ENST00000564845 CNN3Q15417 329 aaKnown RBP3.16□□□□□ -1.9
CHD9-213ENST00000564845 DECR1Q16698 335 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 RTL8BQ17RB0 113 aa3.16□□□□□ -1.9
CHD9-213ENST00000564845 ZNF765Q7L2R6 523 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms