RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 ZNF572Q7Z3I7 529 aaPredicted RBP12.67□□□□□ -0.38
CDR2-204ENST00000564542 LRRN4CLQ8ND94 238 aa12.67□□□□□ -0.38
CDR2-204ENST00000564542 OR5M1Q8NGP8 315 aa12.67□□□□□ -0.38
CDR2-204ENST00000564542 C16orf78Q8WTQ4 265 aa12.67□□□□□ -0.38
CDR2-204ENST00000564542 RTN4RQ9BZR6 473 aa12.67□□□□□ -0.38
CDR2-204ENST00000564542 KLHL4Q9C0H6 718 aa12.67□□□□□ -0.38
CDR2-204ENST00000564542 FAM120CQ9NX05 1096 aaKnown RBP12.67□□□□□ -0.38
CDR2-204ENST00000564542 FLRT3Q9NZU0 649 aa12.67□□□□□ -0.38
CDR2-204ENST00000564542 AP4B1Q9Y6B7 739 aa12.67□□□□□ -0.38
CDR2-204ENST00000564542 CSPG4Q6UVK1 2322 aa12.66□□□□□ -0.38
CDR2-204ENST00000564542 HEATR5AQ86XA9 2040 aa12.66□□□□□ -0.38
CDR2-204ENST00000564542 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.66□□□□□ -0.38
CDR2-204ENST00000564542 TMCC2O75069 709 aa12.66□□□□□ -0.38
CDR2-204ENST00000564542 THBDP07204 575 aa12.66□□□□□ -0.38
CDR2-204ENST00000564542 DECR1Q16698 335 aa12.66□□□□□ -0.38
CDR2-204ENST00000564542 SH2D4BQ5SQS7 431 aa12.66□□□□□ -0.38
CDR2-204ENST00000564542 ANKRD34AQ69YU3 496 aa12.66□□□□□ -0.38
CDR2-204ENST00000564542 C8orf74Q6P047 294 aa12.66□□□□□ -0.38
CDR2-204ENST00000564542 GPRIN3Q6ZVF9 776 aa12.66□□□□□ -0.38
CDR2-204ENST00000564542 CXXC5Q7LFL8 322 aaKnown RBP12.66□□□□□ -0.38
CDR2-204ENST00000564542 GGNQ86UU5 652 aa12.66□□□□□ -0.38
CDR2-204ENST00000564542 OR6K3Q8NGY3 331 aa12.66□□□□□ -0.38
CDR2-204ENST00000564542 TMEM171Q8WVE6 324 aa12.66□□□□□ -0.38
CDR2-204ENST00000564542 C11orf24Q96F05 449 aaPredicted RBP12.66□□□□□ -0.38
CDR2-204ENST00000564542 APIPQ96GX9 242 aa12.66□□□□□ -0.38
CDR2-204ENST00000564542 TMEM237Q96Q45 408 aa12.66□□□□□ -0.38
CDR2-204ENST00000564542 BBS4Q96RK4 519 aa12.66□□□□□ -0.38
CDR2-204ENST00000564542 EBPLQ9BY08 206 aa12.66□□□□□ -0.38
CDR2-204ENST00000564542 CDC42EP4Q9H3Q1 356 aaKnown RBP12.66□□□□□ -0.38
CDR2-204ENST00000564542 CXorf56Q9H5V9 222 aa12.66□□□□□ -0.38
CDR2-204ENST00000564542 ZNF701Q9NV72 531 aaPredicted RBP12.66□□□□□ -0.38
CDR2-204ENST00000564542 ZNF180Q9UJW8 692 aa12.66□□□□□ -0.38
CDR2-204ENST00000564542 EMC9Q9Y3B6 208 aa12.66□□□□□ -0.38
CDR2-204ENST00000564542 COL6A5A8TX70 2615 aa12.66□□□□□ -0.38
CDR2-204ENST00000564542 ATRQ13535 2644 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 IGLV3-32A0A0A0MS00 114 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 MYO1GB0I1T2 1018 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 TRIM49D1C9J1S8 452 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 KLF4O43474 513 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 AQP8O94778 261 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 SUPT7LO94864 414 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 PSMG1O95456 288 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 IL33O95760 270 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 DDCP20711 480 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 HMOX2P30519 316 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 CASQ1P31415 396 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 CLK3P49761 638 aaKnown RBP12.65□□□□□ -0.38
CDR2-204ENST00000564542 HTR6P50406 440 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 NCBP2P52298 156 aaKnown RBP eCLIP12.65□□□□□ -0.38
CDR2-204ENST00000564542 PSMD4P55036 377 aaKnown RBP12.65□□□□□ -0.38
CDR2-204ENST00000564542 NR1H2P55055 460 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 SGCBQ16585 318 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 EXOC3L2Q2M3D2 409 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 TMEM44Q2T9K0 475 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 UNC50Q53HI1 259 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 ZNF678Q5SXM1 525 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 TMEM107Q6UX40 140 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 ZNF704Q6ZNC4 412 aaPredicted RBP12.65□□□□□ -0.38
CDR2-204ENST00000564542 SH2D5Q6ZV89 423 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 SPATA3Q8NHX4 192 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 METTL6Q8TCB7 284 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 DUSP19Q8WTR2 217 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 DCAKDQ8WVC6 231 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 GMPPAQ96IJ6 420 aaPredicted RBP12.65□□□□□ -0.38
CDR2-204ENST00000564542 Q9N2J8 555 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 PLSCR4Q9NRQ2 329 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 DMGDHQ9UI17 866 aaKnown RBP12.65□□□□□ -0.38
CDR2-204ENST00000564542 MRTO4Q9UKD2 239 aaKnown RBP12.65□□□□□ -0.38
CDR2-204ENST00000564542 ADAM21Q9UKJ8 722 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 C19orf53Q9UNZ5 99 aaPredicted RBP12.65□□□□□ -0.38
CDR2-204ENST00000564542 STK38LQ9Y2H1 464 aa12.65□□□□□ -0.38
CDR2-204ENST00000564542 UQCRHLA0A096LP55 91 aa12.64□□□□□ -0.39
CDR2-204ENST00000564542 UPK1AO00322 258 aa12.64□□□□□ -0.39
CDR2-204ENST00000564542 JUNP05412 331 aaKnown RBP12.64□□□□□ -0.39
CDR2-204ENST00000564542 ANXA4P09525 319 aaPredicted RBP12.64□□□□□ -0.39
CDR2-204ENST00000564542 ZNF17P17021 662 aa12.64□□□□□ -0.39
CDR2-204ENST00000564542 TAC1P20366 129 aa12.64□□□□□ -0.39
CDR2-204ENST00000564542 ZNF763Q0D2J5 394 aa12.64□□□□□ -0.39
CDR2-204ENST00000564542 ZNHIT3Q15649 155 aaPredicted RBP12.64□□□□□ -0.39
CDR2-204ENST00000564542 TEX35Q5T0J7 233 aa12.64□□□□□ -0.39
CDR2-204ENST00000564542 STAC2Q6ZMT1 411 aa12.64□□□□□ -0.39
CDR2-204ENST00000564542 MARCH3Q86UD3 253 aa12.64□□□□□ -0.39
CDR2-204ENST00000564542 OR2L13Q8N349 312 aa12.64□□□□□ -0.39
CDR2-204ENST00000564542 LMF2Q9BU23 707 aaKnown RBP12.64□□□□□ -0.39
CDR2-204ENST00000564542 TBL1XR1Q9BZK7 514 aa12.64□□□□□ -0.39
CDR2-204ENST00000564542 FANCFQ9NPI8 374 aa12.64□□□□□ -0.39
CDR2-204ENST00000564542 DDX18Q9NVP1 670 aaKnown RBP12.64□□□□□ -0.39
CDR2-204ENST00000564542 SIRT5Q9NXA8 310 aa12.64□□□□□ -0.39
CDR2-204ENST00000564542 STOML1Q9UBI4 398 aa12.64□□□□□ -0.39
CDR2-204ENST00000564542 GRID1Q9ULK0 1009 aa12.64□□□□□ -0.39
CDR2-204ENST00000564542 MXRA5Q9NR99 2828 aa12.63□□□□□ -0.39
CDR2-204ENST00000564542 CCDC151A5D8V7 595 aa12.63□□□□□ -0.39
CDR2-204ENST00000564542 POC1B-GALNT4F8VUJ3 575 aa12.63□□□□□ -0.39
CDR2-204ENST00000564542 EIF1AYO14602 144 aaKnown RBP12.63□□□□□ -0.39
CDR2-204ENST00000564542 HS3ST1O14792 307 aa12.63□□□□□ -0.39
CDR2-204ENST00000564542 SS18L1O75177 396 aaPredicted RBP12.63□□□□□ -0.39
CDR2-204ENST00000564542 ANGPTL1O95841 491 aa12.63□□□□□ -0.39
CDR2-204ENST00000564542 PLGP00747 810 aaPredicted RBP12.63□□□□□ -0.39
CDR2-204ENST00000564542 ENO1P06733 434 aaKnown RBP12.63□□□□□ -0.39
CDR2-204ENST00000564542 IL11P20809 199 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms