RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 CHMP1BQ7LBR1 199 aa21.54■■□□□ 1.04
NME3-206ENST00000564252 WFDC11Q8NEX6 87 aa21.54■■□□□ 1.04
NME3-206ENST00000564252 FIG4Q92562 907 aa21.54■■□□□ 1.04
NME3-206ENST00000564252 NDRG3Q9UGV2 375 aa21.54■■□□□ 1.04
NME3-206ENST00000564252 CCL27Q9Y4X3 112 aa21.54■■□□□ 1.04
NME3-206ENST00000564252 OR2M5A3KFT3 312 aa21.53■■□□□ 1.04
NME3-206ENST00000564252 CRCPO75575 148 aa21.53■■□□□ 1.04
NME3-206ENST00000564252 SMNDC1O75940 238 aaKnown RBP eCLIP21.53■■□□□ 1.04
NME3-206ENST00000564252 IFI6P09912 130 aa21.53■■□□□ 1.04
NME3-206ENST00000564252 HOXC12P31275 282 aa21.53■■□□□ 1.04
NME3-206ENST00000564252 DNAJB13P59910 316 aa21.53■■□□□ 1.04
NME3-206ENST00000564252 KIAA0040Q15053 153 aa21.53■■□□□ 1.04
NME3-206ENST00000564252 ZNHIT3Q15649 155 aaPredicted RBP21.53■■□□□ 1.04
NME3-206ENST00000564252 MARCH3Q86UD3 253 aa21.53■■□□□ 1.04
NME3-206ENST00000564252 CNEP1R1Q8N9A8 125 aa21.53■■□□□ 1.04
NME3-206ENST00000564252 OR5M1Q8NGP8 315 aa21.53■■□□□ 1.04
NME3-206ENST00000564252 DUSP19Q8WTR2 217 aa21.53■■□□□ 1.04
NME3-206ENST00000564252 EGLN2Q96KS0 407 aa21.53■■□□□ 1.04
NME3-206ENST00000564252 RHOXF2Q9BQY4 288 aa21.53■■□□□ 1.04
NME3-206ENST00000564252 RRAGDQ9NQL2 400 aaPredicted RBP21.53■■□□□ 1.04
NME3-206ENST00000564252 NAV3Q8IVL0 2385 aa21.52■■□□□ 1.04
NME3-206ENST00000564252 LINC01387J3KSC0 135 aa21.52■■□□□ 1.04
NME3-206ENST00000564252 CASKO14936 926 aa21.52■■□□□ 1.04
NME3-206ENST00000564252 PLIN3O60664 434 aa21.52■■□□□ 1.04
NME3-206ENST00000564252 KIR2DL2P43627 348 aaPredicted RBP21.52■■□□□ 1.04
NME3-206ENST00000564252 CLDN20P56880 219 aa21.52■■□□□ 1.04
NME3-206ENST00000564252 EEFSECP57772 596 aaKnown RBP21.52■■□□□ 1.04
NME3-206ENST00000564252 ZNF474Q6S9Z5 364 aaPredicted RBP21.52■■□□□ 1.04
NME3-206ENST00000564252 BTLAQ7Z6A9 289 aa21.52■■□□□ 1.04
NME3-206ENST00000564252 C1GALT1C1Q96EU7 318 aa21.52■■□□□ 1.04
NME3-206ENST00000564252 METTL2AQ96IZ6 378 aaKnown RBP21.52■■□□□ 1.04
NME3-206ENST00000564252 PTGES2Q9H7Z7 377 aa21.52■■□□□ 1.04
NME3-206ENST00000564252 MRTO4Q9UKD2 239 aaKnown RBP21.52■■□□□ 1.04
NME3-206ENST00000564252 EIF3LQ9Y262 564 aaKnown RBP21.52■■□□□ 1.04
NME3-206ENST00000564252 KIF2AO00139 706 aaPredicted RBP21.51■■□□□ 1.03
NME3-206ENST00000564252 SEC14L5O43304 696 aa21.51■■□□□ 1.03
NME3-206ENST00000564252 TNFRSF21O75509 655 aa21.51■■□□□ 1.03
NME3-206ENST00000564252 UROSP10746 265 aa21.51■■□□□ 1.03
NME3-206ENST00000564252 PRPH2P23942 346 aa21.51■■□□□ 1.03
NME3-206ENST00000564252 RFX3P48380 749 aa21.51■■□□□ 1.03
NME3-206ENST00000564252 PSMD4P55036 377 aaKnown RBP21.51■■□□□ 1.03
NME3-206ENST00000564252 CCDC153Q494R4 210 aa21.51■■□□□ 1.03
NME3-206ENST00000564252 CFAP157Q5JU67 520 aa21.51■■□□□ 1.03
NME3-206ENST00000564252 ZNF551Q7Z340 670 aaPredicted RBP21.51■■□□□ 1.03
NME3-206ENST00000564252 KRTAP1-3Q8IUG1 177 aa21.51■■□□□ 1.03
NME3-206ENST00000564252 GSPT2Q8IYD1 628 aaKnown RBP21.51■■□□□ 1.03
NME3-206ENST00000564252 KIF18AQ8NI77 898 aa21.51■■□□□ 1.03
NME3-206ENST00000564252 PGM2Q96G03 612 aa21.51■■□□□ 1.03
NME3-206ENST00000564252 WFIKKN1Q96NZ8 548 aa21.51■■□□□ 1.03
NME3-206ENST00000564252 PIGQQ9BRB3 760 aa21.51■■□□□ 1.03
NME3-206ENST00000564252 PINK1Q9BXM7 581 aa21.51■■□□□ 1.03
NME3-206ENST00000564252 OPN3Q9H1Y3 402 aaPredicted RBP21.51■■□□□ 1.03
NME3-206ENST00000564252 C12orf65Q9H3J6 166 aaKnown RBP21.51■■□□□ 1.03
NME3-206ENST00000564252 RNF122Q9H9V4 155 aa21.51■■□□□ 1.03
NME3-206ENST00000564252 NEUROD4Q9HD90 331 aa21.51■■□□□ 1.03
NME3-206ENST00000564252 BEX4Q9NWD9 120 aaPredicted RBP21.51■■□□□ 1.03
NME3-206ENST00000564252 OXSMQ9NWU1 459 aa21.51■■□□□ 1.03
NME3-206ENST00000564252 ZNF175Q9Y473 711 aa21.51■■□□□ 1.03
NME3-206ENST00000564252 PTGDR2Q9Y5Y4 395 aa21.51■■□□□ 1.03
NME3-206ENST00000564252 IGLV3-32A0A0A0MS00 114 aa21.5■■□□□ 1.03
NME3-206ENST00000564252 GXYLT2A0PJZ3 443 aa21.5■■□□□ 1.03
NME3-206ENST00000564252 NPIPB8E9PQR5 432 aa21.5■■□□□ 1.03
NME3-206ENST00000564252 H3BML4 177 aa21.5■■□□□ 1.03
NME3-206ENST00000564252 SIAH2O43255 324 aa21.5■■□□□ 1.03
NME3-206ENST00000564252 CTIFO43310 598 aaKnown RBP21.5■■□□□ 1.03
NME3-206ENST00000564252 SEC22BO75396 215 aa21.5■■□□□ 1.03
NME3-206ENST00000564252 UTS2O95399 124 aa21.5■■□□□ 1.03
NME3-206ENST00000564252 CGAP01215 116 aa21.5■■□□□ 1.03
NME3-206ENST00000564252 IGKV1D-16P01601 117 aa21.5■■□□□ 1.03
NME3-206ENST00000564252 GABRA3P34903 492 aa21.5■■□□□ 1.03
NME3-206ENST00000564252 CRHR1P34998 444 aa21.5■■□□□ 1.03
NME3-206ENST00000564252 CD79BP40259 229 aa21.5■■□□□ 1.03
NME3-206ENST00000564252 CLK3P49761 638 aaKnown RBP21.5■■□□□ 1.03
NME3-206ENST00000564252 GLYR1Q49A26 553 aaPredicted RBP21.5■■□□□ 1.03
NME3-206ENST00000564252 CLEC6AQ6EIG7 209 aa21.5■■□□□ 1.03
NME3-206ENST00000564252 APOOLQ6UXV4 268 aa21.5■■□□□ 1.03
NME3-206ENST00000564252 FNDC9Q8TBE3 224 aa21.5■■□□□ 1.03
NME3-206ENST00000564252 HOXB13Q92826 284 aaPredicted RBP21.5■■□□□ 1.03
NME3-206ENST00000564252 C3orf14Q9HBI5 128 aa21.5■■□□□ 1.03
NME3-206ENST00000564252 C6orf203Q9P0P8 240 aaPredicted RBP21.5■■□□□ 1.03
NME3-206ENST00000564252 TTC36A6NLP5 189 aa21.49■■□□□ 1.03
NME3-206ENST00000564252 DEFB108AA8MXU0 73 aa21.49■■□□□ 1.03
NME3-206ENST00000564252 EMC8O43402 210 aa21.49■■□□□ 1.03
NME3-206ENST00000564252 ANGPTL1O95841 491 aa21.49■■□□□ 1.03
NME3-206ENST00000564252 SHBGP04278 402 aa21.49■■□□□ 1.03
NME3-206ENST00000564252 CCKARP32238 428 aa21.49■■□□□ 1.03
NME3-206ENST00000564252 MAP3K8P41279 467 aa21.49■■□□□ 1.03
NME3-206ENST00000564252 CCT5P48643 541 aa21.49■■□□□ 1.03
NME3-206ENST00000564252 SIRPAP78324 504 aa21.49■■□□□ 1.03
NME3-206ENST00000564252 PRR5P85299 388 aa21.49■■□□□ 1.03
NME3-206ENST00000564252 HSPB3Q12988 150 aa21.49■■□□□ 1.03
NME3-206ENST00000564252 GUSBP1Q15486 140 aa21.49■■□□□ 1.03
NME3-206ENST00000564252 TMEM44Q2T9K0 475 aa21.49■■□□□ 1.03
NME3-206ENST00000564252 GRAMD1BQ3KR37 738 aa21.49■■□□□ 1.03
NME3-206ENST00000564252 ANKRD26P1Q6NSI1 321 aa21.49■■□□□ 1.03
NME3-206ENST00000564252 CXorf67Q86X51 503 aaPredicted RBP21.49■■□□□ 1.03
NME3-206ENST00000564252 METTL25Q8N6Q8 603 aa21.49■■□□□ 1.03
NME3-206ENST00000564252 PIK3R3Q92569 461 aa21.49■■□□□ 1.03
NME3-206ENST00000564252 GFM2Q969S9 779 aaKnown RBP21.49■■□□□ 1.03
NME3-206ENST00000564252 ZNF764Q96H86 408 aaPredicted RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms