RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 EXOC3L1Q86VI1 746 aa16.01■□□□□ 0.15
NME3-205ENST00000563854 NUP43Q8NFH3 380 aa16.01■□□□□ 0.15
NME3-205ENST00000563854 TCP10LQ8TDR4 215 aa16.01■□□□□ 0.15
NME3-205ENST00000563854 SMPDL3BQ92485 455 aa16.01■□□□□ 0.15
NME3-205ENST00000563854 ZBED6CLQ96FA7 236 aaPredicted RBP16.01■□□□□ 0.15
NME3-205ENST00000563854 OTUB1Q96FW1 271 aaPredicted RBP16.01■□□□□ 0.15
NME3-205ENST00000563854 FCRL1Q96LA6 429 aa16.01■□□□□ 0.15
NME3-205ENST00000563854 G6PC3Q9BUM1 346 aa16.01■□□□□ 0.15
NME3-205ENST00000563854 RTN4RQ9BZR6 473 aa16.01■□□□□ 0.15
NME3-205ENST00000563854 CLEC4MQ9H2X3 399 aaPredicted RBP16.01■□□□□ 0.15
NME3-205ENST00000563854 EML4Q9HC35 981 aaKnown RBP16.01■□□□□ 0.15
NME3-205ENST00000563854 FAM120CQ9NX05 1096 aaKnown RBP16.01■□□□□ 0.15
NME3-205ENST00000563854 CLCF1Q9UBD9 225 aa16.01■□□□□ 0.15
NME3-205ENST00000563854 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.01■□□□□ 0.15
NME3-205ENST00000563854 FOXD3Q9UJU5 478 aaPredicted RBP16.01■□□□□ 0.15
NME3-205ENST00000563854 V9GYY5 206 aaPredicted RBP16.01■□□□□ 0.15
NME3-205ENST00000563854 CELSR1Q9NYQ6 3014 aa16.01■□□□□ 0.15
NME3-205ENST00000563854 TUBAL3A6NHL2 446 aa16■□□□□ 0.15
NME3-205ENST00000563854 NPIPB8E9PQR5 432 aa16■□□□□ 0.15
NME3-205ENST00000563854 H3BML4 177 aa16■□□□□ 0.15
NME3-205ENST00000563854 SKAP2O75563 359 aaPredicted RBP16■□□□□ 0.15
NME3-205ENST00000563854 CHMP24386 653 aa16■□□□□ 0.15
NME3-205ENST00000563854 DNAJA1P31689 397 aaKnown RBP16■□□□□ 0.15
NME3-205ENST00000563854 HPCAL1P37235 193 aa16■□□□□ 0.15
NME3-205ENST00000563854 ART1P52961 327 aa16■□□□□ 0.15
NME3-205ENST00000563854 KIF18BQ86Y91 864 aa16■□□□□ 0.15
NME3-205ENST00000563854 FADS6Q8N9I5 356 aa16■□□□□ 0.15
NME3-205ENST00000563854 LINC01560Q8TB33 94 aa16■□□□□ 0.15
NME3-205ENST00000563854 DUSP19Q8WTR2 217 aa16■□□□□ 0.15
NME3-205ENST00000563854 FAM222BQ8WU58 562 aa16■□□□□ 0.15
NME3-205ENST00000563854 JADE3Q92613 823 aa16■□□□□ 0.15
NME3-205ENST00000563854 WNT2BQ93097 391 aa16■□□□□ 0.15
NME3-205ENST00000563854 CHMP6Q96FZ7 201 aa16■□□□□ 0.15
NME3-205ENST00000563854 SFXN3Q9BWM7 321 aa16■□□□□ 0.15
NME3-205ENST00000563854 RBM24Q9BX46 236 aaKnown RBP16■□□□□ 0.15
NME3-205ENST00000563854 PTGES2Q9H7Z7 377 aa16■□□□□ 0.15
NME3-205ENST00000563854 LGALS13Q9UHV8 139 aa16■□□□□ 0.15
NME3-205ENST00000563854 TMED5Q9Y3A6 229 aa16■□□□□ 0.15
NME3-205ENST00000563854 MRPS18CQ9Y3D5 142 aaKnown RBP16■□□□□ 0.15
NME3-205ENST00000563854 DOCK7Q96N67 2140 aa16■□□□□ 0.15
NME3-205ENST00000563854 A6NNC1 897 aa15.99■□□□□ 0.15
NME3-205ENST00000563854 PEX11AO75192 247 aa15.99■□□□□ 0.15
NME3-205ENST00000563854 RCBTB2O95199 551 aa15.99■□□□□ 0.15
NME3-205ENST00000563854 IL18BPO95998 194 aa15.99■□□□□ 0.15
NME3-205ENST00000563854 IGKV1D-16P01601 117 aa15.99■□□□□ 0.15
NME3-205ENST00000563854 BCKDHAP12694 445 aa15.99■□□□□ 0.15
NME3-205ENST00000563854 CPOXP36551 454 aa15.99■□□□□ 0.15
NME3-205ENST00000563854 ASMTP46597 345 aa15.99■□□□□ 0.15
NME3-205ENST00000563854 B3GALT5-AS1P59052 145 aa15.99■□□□□ 0.15
NME3-205ENST00000563854 GRAMD1BQ3KR37 738 aa15.99■□□□□ 0.15
NME3-205ENST00000563854 VPS26BQ4G0F5 336 aa15.99■□□□□ 0.15
NME3-205ENST00000563854 FIGNL1Q6PIW4 674 aa15.99■□□□□ 0.15
NME3-205ENST00000563854 RNF165Q6ZSG1 346 aa15.99■□□□□ 0.15
NME3-205ENST00000563854 MEIOBQ8N635 442 aa15.99■□□□□ 0.15
NME3-205ENST00000563854 GATSQ8NAP1 163 aa15.99■□□□□ 0.15
NME3-205ENST00000563854 CEP70Q8NHQ1 597 aa15.99■□□□□ 0.15
NME3-205ENST00000563854 GOT1L1Q8NHS2 421 aaPredicted RBP15.99■□□□□ 0.15
NME3-205ENST00000563854 ZFP3Q96NJ6 502 aa15.99■□□□□ 0.15
NME3-205ENST00000563854 MS4A4EQ96PG1 132 aa15.99■□□□□ 0.15
NME3-205ENST00000563854 YIPF4Q9BSR8 244 aa15.99■□□□□ 0.15
NME3-205ENST00000563854 C1orf50Q9BV19 199 aa15.99■□□□□ 0.15
NME3-205ENST00000563854 ACBD3Q9H3P7 528 aa15.99■□□□□ 0.15
NME3-205ENST00000563854 RASSF1Q9NS23 344 aa15.99■□□□□ 0.15
NME3-205ENST00000563854 TTC36A6NLP5 189 aa15.98■□□□□ 0.15
NME3-205ENST00000563854 TMEM114B3SHH9 223 aa15.98■□□□□ 0.15
NME3-205ENST00000563854 H0YC42 278 aa15.98■□□□□ 0.15
NME3-205ENST00000563854 SMNDC1O75940 238 aaKnown RBP eCLIP15.98■□□□□ 0.15
NME3-205ENST00000563854 SLU7O95391 586 aaKnown RBP15.98■□□□□ 0.15
NME3-205ENST00000563854 ANGPTL1O95841 491 aa15.98■□□□□ 0.15
NME3-205ENST00000563854 TGM6O95932 706 aa15.98■□□□□ 0.15
NME3-205ENST00000563854 ACP2P11117 423 aa15.98■□□□□ 0.15
NME3-205ENST00000563854 PEPDP12955 493 aa15.98■□□□□ 0.15
NME3-205ENST00000563854 CREB1P16220 341 aa15.98■□□□□ 0.15
NME3-205ENST00000563854 MAPK1P28482 360 aa15.98■□□□□ 0.15
NME3-205ENST00000563854 TPD52P55327 224 aaPredicted RBP15.98■□□□□ 0.15
NME3-205ENST00000563854 PDE7AQ13946 482 aa15.98■□□□□ 0.15
NME3-205ENST00000563854 GANABQ14697 944 aaKnown RBP15.98■□□□□ 0.15
NME3-205ENST00000563854 TESK1Q15569 626 aa15.98■□□□□ 0.15
NME3-205ENST00000563854 UGT3A2Q3SY77 523 aa15.98■□□□□ 0.15
NME3-205ENST00000563854 PPP4R4Q6NUP7 873 aa15.98■□□□□ 0.15
NME3-205ENST00000563854 R3HCC1LQ7Z5L2 792 aaKnown RBP15.98■□□□□ 0.15
NME3-205ENST00000563854 ADGRE4PQ86SQ3 457 aa15.98■□□□□ 0.15
NME3-205ENST00000563854 CNEP1R1Q8N9A8 125 aa15.98■□□□□ 0.15
NME3-205ENST00000563854 CDRT4Q8N9R6 151 aa15.98■□□□□ 0.15
NME3-205ENST00000563854 PPP1R14CQ8TAE6 165 aa15.98■□□□□ 0.15
NME3-205ENST00000563854 AENQ8WTP8 325 aaKnown RBP15.98■□□□□ 0.15
NME3-205ENST00000563854 C1GALT1C1Q96EU7 318 aa15.98■□□□□ 0.15
NME3-205ENST00000563854 ZNF764Q96H86 408 aaPredicted RBP15.98■□□□□ 0.15
NME3-205ENST00000563854 PPP3R2Q96LZ3 170 aa15.98■□□□□ 0.15
NME3-205ENST00000563854 LIME1Q9H400 295 aa15.98■□□□□ 0.15
NME3-205ENST00000563854 GALNT8Q9NY28 637 aa15.98■□□□□ 0.15
NME3-205ENST00000563854 OR2M5A3KFT3 312 aa15.97■□□□□ 0.15
NME3-205ENST00000563854 SLC22A20A6NK97 555 aa15.97■□□□□ 0.15
NME3-205ENST00000563854 SHISA8B8ZZ34 492 aa15.97■□□□□ 0.15
NME3-205ENST00000563854 SCAMP2O15127 329 aaKnown RBP15.97■□□□□ 0.15
NME3-205ENST00000563854 EMC8O43402 210 aa15.97■□□□□ 0.15
NME3-205ENST00000563854 TBX19O60806 448 aa15.97■□□□□ 0.15
NME3-205ENST00000563854 NKX2-2O95096 273 aa15.97■□□□□ 0.15
NME3-205ENST00000563854 FGF4P08620 206 aa15.97■□□□□ 0.15
NME3-205ENST00000563854 IFI6P09912 130 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms