RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 ASB6Q9NWX5 421 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 EXO1Q9UQ84 846 aaKnown RBP5.94□□□□□ -1.46
CLK3-212ENST00000563418 RASD1Q9Y272 281 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 WNK3Q9BYP7 1800 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 A0A1B0GTQ1 180 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 EEF1E1-BLOC1S5C9J1V9 151 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 RPLP2P05387 115 aaKnown RBP5.93□□□□□ -1.46
CLK3-212ENST00000563418 CBLP22681 906 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 WDR5P61964 334 aaKnown RBP5.93□□□□□ -1.46
CLK3-212ENST00000563418 MOB1BQ7L9L4 216 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 GOLGA7Q7Z5G4 137 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 CLEC14AQ86T13 490 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 PCNPQ8WW12 178 aaKnown RBP5.93□□□□□ -1.46
CLK3-212ENST00000563418 HGDQ93099 445 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 SLAMF9Q96A28 289 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 CDK15Q96Q40 435 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 PIGQQ9BRB3 760 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 ATXN7L1Q9ULK2 861 aaPredicted RBP5.93□□□□□ -1.46
CLK3-212ENST00000563418 A0A1W2PQ67 120 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 ACOD1A6NK06 481 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 PPM1DO15297 605 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 ZNF623O75123 536 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 SNHG28P0DPA3 235 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 SFTPCP11686 197 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 RAB6AP20340 208 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 DDTP30046 118 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 STC1P52823 247 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 RPS13P62277 151 aaKnown RBP5.93□□□□□ -1.46
CLK3-212ENST00000563418 GALNT2Q10471 571 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 HYAL2Q12891 473 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 MPPED2Q15777 294 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 UBE2R2Q712K3 238 aaPredicted RBP5.93□□□□□ -1.46
CLK3-212ENST00000563418 TMEM174Q8WUU8 243 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 ATOH1Q92858 354 aaPredicted RBP5.93□□□□□ -1.46
CLK3-212ENST00000563418 ZBTB8AQ96BR9 441 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 NTPCRQ9BSD7 190 aaKnown RBP5.93□□□□□ -1.46
CLK3-212ENST00000563418 SUCNR1Q9BXA5 334 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 ALX4Q9H161 411 aaPredicted RBP5.93□□□□□ -1.46
CLK3-212ENST00000563418 SEMA4GQ9NTN9 838 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 TMEM129A0AVI4 362 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 OR6C6A6NF89 314 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 ZNF729A6NN14 1252 aaPredicted RBP5.93□□□□□ -1.46
CLK3-212ENST00000563418 UMAD1C9J7I0 102 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 PPP5D1E7EU14 171 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 SIX3O95343 332 aaPredicted RBP5.93□□□□□ -1.46
CLK3-212ENST00000563418 SLC16A8O95907 504 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 GJA5P36382 358 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 PIGAP37287 484 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 MRPL19P49406 292 aaKnown RBP5.93□□□□□ -1.46
CLK3-212ENST00000563418 RNF144AP50876 292 aaPredicted RBP5.93□□□□□ -1.46
CLK3-212ENST00000563418 IL13RA1P78552 427 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 LRRC32Q14392 662 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 ACTBL2Q562R1 376 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 C9orf152Q5JTZ5 239 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 TMCO2Q7Z6W1 182 aaPredicted RBP5.93□□□□□ -1.46
CLK3-212ENST00000563418 FRMD1Q8N878 549 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 OR2G2Q8NGZ5 317 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 BPIFA2Q96DR5 249 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 PCDHB9Q9Y5E1 797 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 TEX13DA0A0J9YY54 714 aaPredicted RBP5.93□□□□□ -1.46
CLK3-212ENST00000563418 GABARAPH6UMI1 98 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 GTF2A2P52657 109 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 TUSC3Q13454 348 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 TCEA2Q15560 299 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 TRIM61Q5EBN2 209 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 REC114Q7Z4M0 266 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 OSTM1Q86WC4 334 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 SERPINA12Q8IW75 414 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 FAM185AQ8N0U4 392 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 CHST13Q8NET6 341 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 OR5W2Q8NH69 310 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 TIFAQ96CG3 184 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 MBOAT4Q96T53 435 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 CNN2Q99439 309 aaKnown RBP5.93□□□□□ -1.46
CLK3-212ENST00000563418 ZNF275Q9NSD4 429 aaPredicted RBP5.93□□□□□ -1.46
CLK3-212ENST00000563418 STRAPQ9Y3F4 350 aaKnown RBP5.93□□□□□ -1.46
CLK3-212ENST00000563418 ECM29Q5VYK3 1845 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 UBR1Q8IWV7 1749 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 SLC22A23A1A5C7 686 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 ELOA3DA6NLF2 546 aaPredicted RBP5.93□□□□□ -1.46
CLK3-212ENST00000563418 ENPP3O14638 875 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 TXNP10599 105 aaKnown RBP5.93□□□□□ -1.46
CLK3-212ENST00000563418 CHRNA4P43681 627 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 ELOA3BQ3SY89 546 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 PARGQ86W56 976 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 PQLC3Q8N755 202 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 TMEM145Q8NBT3 493 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 BPIFCQ8NFQ6 507 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 ELOA3Q8NG57 546 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 GPER1Q99527 375 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 PXMP2Q9NR77 195 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 SLCO1B1Q9Y6L6 691 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 ENPP4Q9Y6X5 453 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 SPATA31A1Q5TZJ5 1347 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 ANKUB1A6NFN9 424 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 WASH3PC4AMC7 463 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 K7EPK0 472 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 ADAMTS3O15072 1205 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 ABLIM3O94929 683 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 SFTPBP07988 381 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms