RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 CORO7P57737 925 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 GPX6P59796 221 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 ACTG1P63261 375 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 SPOCK1Q08629 439 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 DDX39BQ13838 428 aaKnown RBP6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 EFR3AQ14156 821 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 SPANXN3Q5MJ09 141 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 SULT1C3Q6IMI6 304 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 GRHL2Q6ISB3 625 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 LRRC70Q7Z2Q7 622 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 IGDCC3Q8IVU1 814 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 MUC15Q8N387 334 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 FAM216AQ8WUB2 273 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 KISS1RQ969F8 398 aaPredicted RBP6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 MTERF1Q99551 399 aaKnown RBP6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 MCMBPQ9BTE3 642 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 PRRG4Q9BZD6 226 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 CD244Q9BZW8 370 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 BRINP2Q9C0B6 783 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 ANKRA2Q9H9E1 313 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 WDR41Q9HAD4 459 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 PRM3Q9NNZ6 103 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 SAYSD1Q9NPB0 183 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 FLRT3Q9NZU0 649 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 PPP4R1LQ9P1A2 415 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 TMEFF2Q9UIK5 374 aaPredicted RBP6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 PSAT1Q9Y617 370 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 KMT2CQ8NEZ4 4911 aaKnown RBP6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 UQCRHLA0A096LP55 91 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 IGLV3-32A0A0A0MS00 114 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 A0A0J9YW62 118 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 FAM95CA0A1B0GW59 222 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 ZNF814B7Z6K7 855 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 EIF1AYO14602 144 aaKnown RBP6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 ADAMDEC1O15204 470 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 SCO2O43819 266 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 CXCL13O43927 109 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 CCNT2O60583 730 aaKnown RBP6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 PGM3O95394 542 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 TTC4O95801 387 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 ADAP00813 363 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 FGGP02679 453 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 PSMA4P25789 261 aaKnown RBP6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 PTX3P26022 381 aaPredicted RBP6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 IL2RGP31785 369 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 SRP14P37108 136 aaKnown RBP6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 PDLIM4P50479 330 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 ARFIP2P53365 341 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 ITGADQ13349 1161 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 CUL3Q13618 768 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 SLMAPQ14BN4 828 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 PPA1Q15181 289 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 OR4D1Q15615 310 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 LTB4RQ15722 352 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 ZSWIM7Q19AV6 140 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 AWAT1Q58HT5 328 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 CYP20A1Q6UW02 462 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 BHLHA15Q7RTS1 189 aaPredicted RBP6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 TBC1D1Q86TI0 1168 aaPredicted RBP6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 ZC3HC1Q86WB0 502 aaKnown RBP6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 CCDC25Q86WR0 208 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 TDRPQ86YL5 185 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 SPATA6LQ8N4H0 392 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 LRRC17Q8N6Y2 441 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 OR4N2Q8NGD1 307 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 RNF128Q8TEB7 428 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 GCDHQ92947 438 aaPredicted RBP6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 C3orf49Q96BT1 292 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 RADILQ96JH8 1075 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 VSTM2LQ96N03 204 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 ZNF681Q96N22 645 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 FOXN4Q96NZ1 517 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 ZNF747Q9BV97 191 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 POPDC3Q9HBV1 291 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 PAQR5Q9NXK6 330 aaPredicted RBP6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 PRODH2Q9UF12 536 aa6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.81□□□□□ -1.32
HERPUD1-206ENST00000563343 LRP5LA4QPB2 252 aa6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 TNFSF11O14788 317 aa6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 IPO7O95373 1038 aaKnown RBP6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 CD1DP15813 335 aa6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 PCSK2P16519 638 aa6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 EDNRAP25101 427 aa6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 FEN1P39748 380 aaKnown RBP6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 FABP6P51161 128 aa6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 MRPS35P82673 323 aaKnown RBP6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 MORF4L2Q15014 288 aa6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 MST1LQ2TV78 715 aa6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 MIDNQ504T8 468 aa6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 RNASEH2BQ5TBB1 312 aaKnown RBP6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 C6orf163Q5TEZ5 329 aa6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 PPP4R4Q6NUP7 873 aa6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 ZNF544Q6NX49 715 aa6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 SLC48A1Q6P1K1 146 aa6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 LARP4Q71RC2 724 aaKnown RBP eCLIP6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 NUDT13Q86X67 352 aa6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 TMEM139Q8IV31 216 aa6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 TUSC5Q8IXB3 177 aa6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 FBXL14Q8N1E6 418 aa6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 PLD6Q8N2A8 252 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms