RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 ZNF85Q03923 595 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 PAX8Q06710 450 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 ZNF33BQ06732 778 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 ZMYND11Q15326 602 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 SIX1Q15475 284 aaPredicted RBP2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 SLC1A5Q15758 541 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 TMEM44Q2T9K0 475 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 DCAF4L1Q3SXM0 396 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 CCDC183Q5T5S1 534 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 TTC23Q5W5X9 447 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 RHBDD2Q6NTF9 364 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 PAQR6Q6TCH4 344 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 ATRAIDQ6UW56 229 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 BTNL3Q6UXE8 466 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 ACOT1Q86TX2 421 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 ZNF679Q8IYX0 411 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 TMEM123Q8N131 208 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 LRRC43Q8N309 656 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 Q8N377 158 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 FAM133AQ8N9E0 248 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 EIF1ADQ8N9N8 165 aaKnown RBP2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 OR1B1Q8NGR6 318 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 DLX4Q92988 240 aaPredicted RBP2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 DNAJA3Q96EY1 480 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 CNDP1Q96KN2 507 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 ZNF597Q96LX8 424 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 TCEANC2Q96MN5 208 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 CASD1Q96PB1 797 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 PSKH2Q96QS6 385 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 NPAS2Q99743 824 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 TMEM121Q9BTD3 319 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 CCDC28BQ9BUN5 200 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 NT5C3AQ9H0P0 336 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 SLC25A51Q9H1U9 297 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 ZNF446Q9NWS9 450 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 DCAF16Q9NXF7 216 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 THYN1Q9P016 225 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 RNF14Q9UBS8 474 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 MOB4Q9Y3A3 225 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 EXOSC1Q9Y3B2 195 aaKnown RBP2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 NAALAD2Q9Y3Q0 740 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 ASB3Q9Y575 518 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 COL5A2P05997 1499 aaPredicted RBP2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 A0A1B0GTH9 108 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 FBLL1A6NHQ2 334 aaKnown RBP2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 ZSCAN5BA6NJL1 495 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 RPL37AP8A6NKH3 93 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 CCT8L1PA6NM43 557 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 A8MXK9 166 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 C11orf98E9PRG8 122 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 K7EQG2 157 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 UBXN8O00124 270 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 FCN1O00602 326 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 PPIHO43447 177 aaKnown RBP2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 PI15O43692 258 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 CRLF1O75462 422 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 SPAG6O75602 509 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 SERPINA3P01011 423 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 TPM2P07951 284 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 CPN1P15169 458 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 XRCC1P18887 633 aaPredicted RBP2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 PTBP1P26599 531 aaKnown RBP eCLIP2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 HTR2AP28223 471 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 PPP2R1BP30154 601 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 HPCAL1P37235 193 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 CAPGP40121 348 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 SLC1A4P43007 532 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 BDKRB1P46663 353 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 ACADVLP49748 655 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 SRPXP78539 464 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 TNFRSF17Q02223 184 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 RGS1Q08116 209 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 CRMP1Q14194 572 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 CD226Q15762 336 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 SHROOM1Q2M3G4 852 aaPredicted RBP2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 CNPY1Q3B7I2 92 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 RABL6Q3YEC7 729 aaPredicted RBP2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 GGTA1PQ4G0N0 100 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 LRRC23Q53EV4 343 aaPredicted RBP2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 CELF3Q5SZQ8 465 aaKnown RBP2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 ACSM5Q6NUN0 579 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 SYT10Q6XYQ8 523 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 GPRIN3Q6ZVF9 776 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 LRRC70Q7Z2Q7 622 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 RPAINQ86UA6 219 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 VPS36Q86VN1 386 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 PARGQ86W56 976 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 CATSPER3Q86XQ3 398 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 LINC01561Q8N1V8 128 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 ZCCHC7Q8N3Z6 543 aaKnown RBP2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 C17orf47Q8NEP4 570 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 STXBP6Q8NFX7 210 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 OR2T33Q8NG76 320 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 NANPQ8TBE9 248 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 RAET1EQ8TD07 263 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 SDSLQ96GA7 329 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 SENP8Q96LD8 212 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 CCNL2Q96S94 520 aaPredicted RBP2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 SECISBP2Q96T21 854 aaKnown RBP2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 RIT2Q99578 217 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms