RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 SUCLG1P53597 346 aaKnown RBP11.7□□□□□ -0.54
SF3B3-202ENST00000562722 CLDN20P56880 219 aa11.7□□□□□ -0.54
SF3B3-202ENST00000562722 PSG6Q00889 435 aa11.7□□□□□ -0.54
SF3B3-202ENST00000562722 ZNF763Q0D2J5 394 aa11.7□□□□□ -0.54
SF3B3-202ENST00000562722 C2orf80Q0P641 193 aa11.7□□□□□ -0.54
SF3B3-202ENST00000562722 LCP2Q13094 533 aa11.7□□□□□ -0.54
SF3B3-202ENST00000562722 IMPG1Q17R60 797 aa11.7□□□□□ -0.54
SF3B3-202ENST00000562722 CYP27C1Q4G0S4 372 aa11.7□□□□□ -0.54
SF3B3-202ENST00000562722 C20orf204Q6ZNR8 217 aa11.7□□□□□ -0.54
SF3B3-202ENST00000562722 MARCH3Q86UD3 253 aa11.7□□□□□ -0.54
SF3B3-202ENST00000562722 CIARTQ8N365 385 aaPredicted RBP11.7□□□□□ -0.54
SF3B3-202ENST00000562722 TMEM151AQ8N4L1 468 aa11.7□□□□□ -0.54
SF3B3-202ENST00000562722 ZNF610Q8N9Z0 462 aa11.7□□□□□ -0.54
SF3B3-202ENST00000562722 ARSGQ96EG1 525 aa11.7□□□□□ -0.54
SF3B3-202ENST00000562722 KCNA7Q96RP8 456 aa11.7□□□□□ -0.54
SF3B3-202ENST00000562722 TBL1XR1Q9BZK7 514 aa11.7□□□□□ -0.54
SF3B3-202ENST00000562722 SHCBP1LQ9BZQ2 653 aa11.7□□□□□ -0.54
SF3B3-202ENST00000562722 FAM120CQ9NX05 1096 aaKnown RBP11.7□□□□□ -0.54
SF3B3-202ENST00000562722 TMEM216Q9P0N5 145 aa11.7□□□□□ -0.54
SF3B3-202ENST00000562722 MRTO4Q9UKD2 239 aaKnown RBP11.7□□□□□ -0.54
SF3B3-202ENST00000562722 ABCG2Q9UNQ0 655 aa11.7□□□□□ -0.54
SF3B3-202ENST00000562722 ZNF175Q9Y473 711 aa11.7□□□□□ -0.54
SF3B3-202ENST00000562722 TIMM22Q9Y584 194 aa11.7□□□□□ -0.54
SF3B3-202ENST00000562722 OR2M5A3KFT3 312 aa11.69□□□□□ -0.54
SF3B3-202ENST00000562722 TRIM64A6NGJ6 449 aa11.69□□□□□ -0.54
SF3B3-202ENST00000562722 TRIM64BA6NI03 449 aa11.69□□□□□ -0.54
SF3B3-202ENST00000562722 FADS1O60427 444 aa11.69□□□□□ -0.54
SF3B3-202ENST00000562722 DLX3O60479 287 aa11.69□□□□□ -0.54
SF3B3-202ENST00000562722 CRCPO75575 148 aa11.69□□□□□ -0.54
SF3B3-202ENST00000562722 URI1O94763 535 aaPredicted RBP11.69□□□□□ -0.54
SF3B3-202ENST00000562722 CTAGE8P0CG41 777 aa11.69□□□□□ -0.54
SF3B3-202ENST00000562722 CD8BP10966 210 aa11.69□□□□□ -0.54
SF3B3-202ENST00000562722 IMPDH1P20839 514 aa11.69□□□□□ -0.54
SF3B3-202ENST00000562722 ATP5F1P24539 256 aaPredicted RBP11.69□□□□□ -0.54
SF3B3-202ENST00000562722 GSTM5P46439 218 aa11.69□□□□□ -0.54
SF3B3-202ENST00000562722 PCYT1AP49585 367 aa11.69□□□□□ -0.54
SF3B3-202ENST00000562722 PSMD4P55036 377 aaKnown RBP11.69□□□□□ -0.54
SF3B3-202ENST00000562722 PKNOX1P55347 436 aa11.69□□□□□ -0.54
SF3B3-202ENST00000562722 CLDN15P56746 228 aa11.69□□□□□ -0.54
SF3B3-202ENST00000562722 SLC22A9Q8IVM8 553 aa11.69□□□□□ -0.54
SF3B3-202ENST00000562722 CTAGE4Q8IX94 777 aa11.69□□□□□ -0.54
SF3B3-202ENST00000562722 DUSP19Q8WTR2 217 aa11.69□□□□□ -0.54
SF3B3-202ENST00000562722 RNF138Q8WVD3 245 aa11.69□□□□□ -0.54
SF3B3-202ENST00000562722 C1GALT1C1Q96EU7 318 aa11.69□□□□□ -0.54
SF3B3-202ENST00000562722 HS3ST6Q96QI5 342 aa11.69□□□□□ -0.54
SF3B3-202ENST00000562722 RNF122Q9H9V4 155 aa11.69□□□□□ -0.54
SF3B3-202ENST00000562722 EMC9Q9Y3B6 208 aa11.69□□□□□ -0.54
SF3B3-202ENST00000562722 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.69□□□□□ -0.54
SF3B3-202ENST00000562722 MED12LQ86YW9 2145 aa11.68□□□□□ -0.54
SF3B3-202ENST00000562722 A0A087WV62 115 aa11.68□□□□□ -0.54
SF3B3-202ENST00000562722 MYO1GB0I1T2 1018 aa11.68□□□□□ -0.54
SF3B3-202ENST00000562722 SHISA8B8ZZ34 492 aa11.68□□□□□ -0.54
SF3B3-202ENST00000562722 EIF1AYO14602 144 aaKnown RBP11.68□□□□□ -0.54
SF3B3-202ENST00000562722 SLITRK5O94991 958 aa11.68□□□□□ -0.54
SF3B3-202ENST00000562722 CGAP01215 116 aa11.68□□□□□ -0.54
SF3B3-202ENST00000562722 TBXA2RP21731 343 aa11.68□□□□□ -0.54
SF3B3-202ENST00000562722 EIF1AXP47813 144 aaKnown RBP11.68□□□□□ -0.54
SF3B3-202ENST00000562722 PRKAA2P54646 552 aa11.68□□□□□ -0.54
SF3B3-202ENST00000562722 PPP2R2BQ00005 443 aa11.68□□□□□ -0.54
SF3B3-202ENST00000562722 GALNT18Q6P9A2 607 aa11.68□□□□□ -0.54
SF3B3-202ENST00000562722 PRSS57Q6UWY2 283 aa11.68□□□□□ -0.54
SF3B3-202ENST00000562722 FAM214BQ7L5A3 538 aa11.68□□□□□ -0.54
SF3B3-202ENST00000562722 CCNYL1Q8N7R7 359 aa11.68□□□□□ -0.54
SF3B3-202ENST00000562722 LRRN4CLQ8ND94 238 aa11.68□□□□□ -0.54
SF3B3-202ENST00000562722 GLIPR2Q9H4G4 154 aa11.68□□□□□ -0.54
SF3B3-202ENST00000562722 C3orf14Q9HBI5 128 aa11.68□□□□□ -0.54
SF3B3-202ENST00000562722 MID1IP1Q9NPA3 183 aa11.68□□□□□ -0.54
SF3B3-202ENST00000562722 EQTNQ9NQ60 294 aa11.68□□□□□ -0.54
SF3B3-202ENST00000562722 STOML1Q9UBI4 398 aa11.68□□□□□ -0.54
SF3B3-202ENST00000562722 CLEC4AQ9UMR7 237 aa11.68□□□□□ -0.54
SF3B3-202ENST00000562722 C19orf53Q9UNZ5 99 aaPredicted RBP11.68□□□□□ -0.54
SF3B3-202ENST00000562722 VDAC3Q9Y277 283 aa11.68□□□□□ -0.54
SF3B3-202ENST00000562722 POLR3HQ9Y535 204 aaPredicted RBP11.68□□□□□ -0.54
SF3B3-202ENST00000562722 AP4B1Q9Y6B7 739 aa11.68□□□□□ -0.54
SF3B3-202ENST00000562722 GOLGA8RI6L899 631 aa11.67□□□□□ -0.54
SF3B3-202ENST00000562722 UPK1AO00322 258 aa11.67□□□□□ -0.54
SF3B3-202ENST00000562722 AQP8O94778 261 aa11.67□□□□□ -0.54
SF3B3-202ENST00000562722 KCNH1O95259 989 aa11.67□□□□□ -0.54
SF3B3-202ENST00000562722 UTS2O95399 124 aa11.67□□□□□ -0.54
SF3B3-202ENST00000562722 IL33O95760 270 aa11.67□□□□□ -0.54
SF3B3-202ENST00000562722 ANGPTL1O95841 491 aa11.67□□□□□ -0.54
SF3B3-202ENST00000562722 GABRA3P34903 492 aa11.67□□□□□ -0.54
SF3B3-202ENST00000562722 CTBP2P56545 445 aa11.67□□□□□ -0.54
SF3B3-202ENST00000562722 C17orf67Q0P5P2 114 aa11.67□□□□□ -0.54
SF3B3-202ENST00000562722 WHAMMP3Q1A5X7 153 aa11.67□□□□□ -0.54
SF3B3-202ENST00000562722 PRSS53Q2L4Q9 553 aa11.67□□□□□ -0.54
SF3B3-202ENST00000562722 ALKBH2Q6NS38 261 aa11.67□□□□□ -0.54
SF3B3-202ENST00000562722 PLEKHM3Q6ZWE6 761 aa11.67□□□□□ -0.54
SF3B3-202ENST00000562722 LCA5Q86VQ0 697 aa11.67□□□□□ -0.54
SF3B3-202ENST00000562722 OR2L13Q8N349 312 aa11.67□□□□□ -0.54
SF3B3-202ENST00000562722 METTL25Q8N6Q8 603 aa11.67□□□□□ -0.54
SF3B3-202ENST00000562722 CAVIN3Q969G5 261 aa11.67□□□□□ -0.54
SF3B3-202ENST00000562722 RTN4RQ9BZR6 473 aa11.67□□□□□ -0.54
SF3B3-202ENST00000562722 GRID1Q9ULK0 1009 aa11.67□□□□□ -0.54
SF3B3-202ENST00000562722 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.66□□□□□ -0.54
SF3B3-202ENST00000562722 SYNGR4O95473 234 aa11.66□□□□□ -0.54
SF3B3-202ENST00000562722 GSTA1P08263 222 aa11.66□□□□□ -0.54
SF3B3-202ENST00000562722 PPP3CBP16298 524 aa11.66□□□□□ -0.54
SF3B3-202ENST00000562722 GPC1P35052 558 aa11.66□□□□□ -0.54
SF3B3-202ENST00000562722 PTH2RP49190 550 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms