RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 TMBIM1Q969X1 311 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 TAMM41Q96BW9 452 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 ASB9Q96DX5 294 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 RMND5BQ96G75 393 aaPredicted RBP8.63□□□□□ -1.03
HERC1-206ENST00000559996 FER1L6-AS2Q96M78 137 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 GAL3ST4Q96RP7 486 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 KCTD14Q9BQ13 255 aaPredicted RBP8.63□□□□□ -1.03
HERC1-206ENST00000559996 TREX2Q9BQ50 279 aaPredicted RBP8.63□□□□□ -1.03
HERC1-206ENST00000559996 LHPPQ9H008 270 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 QRSL1Q9H0R6 528 aaKnown RBP8.63□□□□□ -1.03
HERC1-206ENST00000559996 ING2Q9H160 280 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 TRIM45Q9H8W5 580 aaPredicted RBP8.63□□□□□ -1.03
HERC1-206ENST00000559996 PROK2Q9HC23 129 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 ZBTB20Q9HC78 741 aaPredicted RBP8.63□□□□□ -1.03
HERC1-206ENST00000559996 CPNE5Q9HCH3 593 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 Q9N2J8 555 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 ACTR3BQ9P1U1 418 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 P2RX2Q9UBL9 471 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 SUCOQ9UBS9 1254 aaKnown RBP8.63□□□□□ -1.03
HERC1-206ENST00000559996 MKLN1Q9UL63 735 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 LIPT1Q9Y234 373 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 POLHQ9Y253 713 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 ACACAQ13085 2346 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 EML6Q6ZMW3 1958 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 EXPH5Q8NEV8 1989 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 CPAMD8Q8IZJ3 1885 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 NPIPA5A0A0B4J1W7 369 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 A0A0G2JPF8 293 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 A8MUI8 341 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 HNRNPCL2B2RXH8 293 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 HNRNPCL3B7ZW38 293 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 NPIPA7E9PJI5 369 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 ARPC2O15144 300 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 SLC28A2O43868 658 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 KIAA0513O60268 411 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 FADS1O60427 444 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 TPST1O60507 370 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 UGT2B11O75310 529 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 BCAS1O75363 584 aaPredicted RBP8.62□□□□□ -1.03
HERC1-206ENST00000559996 STX11O75558 287 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 OR6B1O95007 311 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 AGR2O95994 175 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 AK1P00568 194 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 FBXO45P0C2W1 286 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 NPIPA8P0DM63 369 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 HNRNPCL4P0DMR1 293 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 NR2F1P10589 423 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 CYP4B1P13584 511 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 NAGAP17050 411 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 CD247P20963 164 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 PNLIPRP2P54317 469 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 GAS1P54826 345 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 ZNHIT3Q15649 155 aaPredicted RBP8.62□□□□□ -1.03
HERC1-206ENST00000559996 ZNF141Q15928 474 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 NTRK2Q16620 822 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 DUSP7Q16829 419 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 CYP51A1Q16850 503 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 DEFB109BQ30KR1 87 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 GLIPR1L2Q4G1C9 344 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 IQCCQ4KMZ1 466 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 ACER2Q5QJU3 275 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 FNDC7Q5VTL7 733 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 LCN8Q6JVE9 175 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 IGFL2Q6UWQ7 119 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 CCDC81Q6ZN84 652 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 CBLL1Q75N03 491 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 HMGN2P46Q86SG4 172 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 COX18Q8N8Q8 333 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 GPR32P1Q8NGA4 272 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 APOBEC4Q8WW27 367 aaKnown RBP8.62□□□□□ -1.03
HERC1-206ENST00000559996 EFHD2Q96C19 240 aaPredicted RBP8.62□□□□□ -1.03
HERC1-206ENST00000559996 OMA1Q96E52 524 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 VPS50Q96JG6 964 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 NODALQ96S42 347 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 MTHFD2LQ9H903 347 aaPredicted RBP8.62□□□□□ -1.03
HERC1-206ENST00000559996 POLE3Q9NRF9 147 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 DCAF13Q9NV06 445 aaKnown RBP8.62□□□□□ -1.03
HERC1-206ENST00000559996 EXD2Q9NVH0 621 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 YARS2Q9Y2Z4 477 aaKnown RBP8.62□□□□□ -1.03
HERC1-206ENST00000559996 PCDHGB3Q9Y5G1 929 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 PCNX3Q9H6A9 2034 aa8.62□□□□□ -1.03
HERC1-206ENST00000559996 CEP295Q9C0D2 2601 aa8.61□□□□□ -1.03
HERC1-206ENST00000559996 TCRBV3S1A0A5B6 114 aa8.61□□□□□ -1.03
HERC1-206ENST00000559996 OR6C70A6NIJ9 312 aa8.61□□□□□ -1.03
HERC1-206ENST00000559996 AGAP5A6NIR3 686 aa8.61□□□□□ -1.03
HERC1-206ENST00000559996 CLDN24A6NM45 220 aa8.61□□□□□ -1.03
HERC1-206ENST00000559996 REM1O75628 298 aa8.61□□□□□ -1.03
HERC1-206ENST00000559996 PPM1BO75688 479 aa8.61□□□□□ -1.03
HERC1-206ENST00000559996 SEMG1P04279 462 aa8.61□□□□□ -1.03
HERC1-206ENST00000559996 ETS2P15036 469 aa8.61□□□□□ -1.03
HERC1-206ENST00000559996 AQP1P29972 269 aa8.61□□□□□ -1.03
HERC1-206ENST00000559996 SOX3P41225 446 aa8.61□□□□□ -1.03
HERC1-206ENST00000559996 ANXA11P50995 505 aaKnown RBP8.61□□□□□ -1.03
HERC1-206ENST00000559996 CCL11P51671 97 aa8.61□□□□□ -1.03
HERC1-206ENST00000559996 CRISP3P54108 245 aa8.61□□□□□ -1.03
HERC1-206ENST00000559996 FBXW4P57775 412 aa8.61□□□□□ -1.03
HERC1-206ENST00000559996 BNIP2Q12982 314 aa8.61□□□□□ -1.03
HERC1-206ENST00000559996 CCNIQ14094 377 aa8.61□□□□□ -1.03
HERC1-206ENST00000559996 DECR1Q16698 335 aa8.61□□□□□ -1.03
HERC1-206ENST00000559996 GPAT3Q53EU6 434 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms