RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 CAMK2AQ9UQM7 478 aa13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 RNF6Q9Y252 685 aa13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 KCNE3Q9Y6H6 103 aa13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 CACNA1CQ13936 2221 aa13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 NBPF19A0A087WUL8 3843 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 FAM90A27PA6NNH2 459 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 ANKRD28O15084 1053 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 HDAC3O15379 428 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 KCNH1O95259 989 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 CPSF4O95639 269 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 C1QCP02747 245 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 SNRPB2P08579 225 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 GLI4P10075 376 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 HTR1EP28566 365 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 PRIM2P49643 509 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 CASP9P55211 416 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 C21orf58P58505 322 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 UFM1P61960 85 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 RPS26P62854 115 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 PSPHP78330 225 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 PRR5P85299 388 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 ART3Q13508 389 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 LSM12Q3MHD2 195 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 SLC9B1Q4ZJI4 515 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 SPANXN4Q5MJ08 99 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 SP5Q6BEB4 398 aaPredicted RBP13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 NXNQ6DKJ4 435 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 XKRXQ6PP77 449 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 APOOLQ6UXV4 268 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 TRIM42Q8IWZ5 723 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 COX18Q8N8Q8 333 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 GATSQ8NAP1 163 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 RAB3IL1Q8TBN0 382 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 TIMP4Q99727 224 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 SH3GL2Q99962 352 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 DSN1Q9H410 356 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 ARGLU1Q9NWB6 273 aaPredicted RBP13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 MED11Q9P086 117 aa13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 RPH3AQ9Y2J0 694 aaPredicted RBP13.5□□□□□ -0.25
RABGGTA-211ENST00000559850 HCFC1P51610 2035 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 NPIPA5A0A0B4J1W7 369 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 FIGNL2A6NMB9 653 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 NPIPA7E9PJI5 369 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 CBR3O75828 277 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 SASH3O75995 380 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 KCNK2O95069 426 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 CLDN14O95500 239 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 NPIPA8P0DM63 369 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 ADH7P40394 386 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 STARP49675 285 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 DGKQP52824 942 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 VPS26BQ4G0F5 336 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 EXOSC6Q5RKV6 272 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 VASNQ6EMK4 673 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 TMEM211Q6ICI0 200 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 PLXDC2Q6UX71 529 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 B3GNT6Q6ZMB0 384 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 CAMKMTQ7Z624 323 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 ULK2Q8IYT8 1036 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 KIRREL3Q8IZU9 778 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 EID3Q8N140 333 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 OR2M3Q8NG83 312 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 OR4K17Q8NGC6 315 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 OR5D16Q8NGK9 328 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 OR4A15Q8NGL6 344 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 OR5M1Q8NGP8 315 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 OR10Q1Q8NGQ4 319 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 OR4C3Q8NH37 302 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 DUSP19Q8WTR2 217 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 OR52B2Q96RD2 323 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 TTYH2Q9BSA4 534 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 UCK2Q9BZX2 261 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 OR2B2Q9GZK3 357 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 SERHL2Q9H4I8 314 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 AIG1Q9NVV5 245 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 GPATCH2Q9NW75 528 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 FAM120CQ9NX05 1096 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 GIN1Q9NXP7 522 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 TAS2R10Q9NYW0 307 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 COQ3Q9NZJ6 369 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 DKKL1Q9UK85 242 aa13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 MRTO4Q9UKD2 239 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-211ENST00000559850 A0A0G2JNJ9 132 aa13.48□□□□□ -0.25
RABGGTA-211ENST00000559850 NKX2-6A6NCS4 301 aa13.48□□□□□ -0.25
RABGGTA-211ENST00000559850 TTC36A6NLP5 189 aa13.48□□□□□ -0.25
RABGGTA-211ENST00000559850 TRPC5OSA6NMA1 111 aa13.48□□□□□ -0.25
RABGGTA-211ENST00000559850 ZNF195O14628 629 aa13.48□□□□□ -0.25
RABGGTA-211ENST00000559850 WDR1O75083 606 aa13.48□□□□□ -0.25
RABGGTA-211ENST00000559850 IL12AP29459 219 aa13.48□□□□□ -0.25
RABGGTA-211ENST00000559850 KIR3DL1P43629 444 aa13.48□□□□□ -0.25
RABGGTA-211ENST00000559850 POU6F2P78424 691 aaPredicted RBP13.48□□□□□ -0.25
RABGGTA-211ENST00000559850 SRYQ05066 204 aa13.48□□□□□ -0.25
RABGGTA-211ENST00000559850 ZNF630Q2M218 657 aaPredicted RBP13.48□□□□□ -0.25
RABGGTA-211ENST00000559850 FAM174BQ3ZCQ3 159 aa13.48□□□□□ -0.25
RABGGTA-211ENST00000559850 OGFOD2Q6N063 350 aa13.48□□□□□ -0.25
RABGGTA-211ENST00000559850 CDC73Q6P1J9 531 aa13.48□□□□□ -0.25
RABGGTA-211ENST00000559850 SEM1Q6ZVN7 128 aa13.48□□□□□ -0.25
RABGGTA-211ENST00000559850 OLIG3Q7RTU3 272 aa13.48□□□□□ -0.25
RABGGTA-211ENST00000559850 SPATA19Q7Z5L4 167 aa13.48□□□□□ -0.25
RABGGTA-211ENST00000559850 NATD1Q8N6N6 113 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms