RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 EXD2Q9NVH0 621 aa13.61□□□□□ -0.23
SNRPA1-207ENST00000559309 KCNE5Q9UJ90 142 aa13.61□□□□□ -0.23
SNRPA1-207ENST00000559309 PRORSD1PA6NEY8 169 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 FAM220BPB1ANY3 271 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 MKRN2OSH3BPM6 223 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 DNAJA2O60884 412 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 ATP5HO75947 161 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 CYP4B1P13584 511 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 HSD17B1P14061 328 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 CD97P48960 835 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 CYB561P49447 251 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 TMED10P49755 219 aaKnown RBP13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 TNFSF10P50591 281 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 KCNAB2Q13303 367 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 VEZF1Q14119 521 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 ZNF141Q15928 474 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 ZNF630Q2M218 657 aaPredicted RBP13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 FNDC7Q5VTL7 733 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 PGM2L1Q6PCE3 622 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 C16orf89Q6UX73 402 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 LINC00696Q6ZRV3 163 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 Q6ZS92 163 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 CCDC80Q76M96 950 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 YTHDF3Q7Z739 585 aaKnown RBP13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 PRR22Q8IZ63 422 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 ARHGAP24Q8N264 748 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 OR10A6Q8NH74 314 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 SPPL2AQ8TCT8 520 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 XAGE5Q8WWM1 108 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 JADE3Q92613 823 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 MAL2Q969L2 176 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 RMND5BQ96G75 393 aaPredicted RBP13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 COL21A1Q96P44 957 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 SIGLEC12Q96PQ1 595 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 G6PC3Q9BUM1 346 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 P2RX2Q9UBL9 471 aa13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 CNOT11Q9UKZ1 510 aaKnown RBP13.6□□□□□ -0.23
SNRPA1-207ENST00000559309 ERVH48-1M5A8F1 160 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 EBAG9O00559 213 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 H6PDO95479 791 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 TBXA2RP21731 343 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 PCGF2P35227 344 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 ADH7P40394 386 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 GSK3BP49841 420 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 CRYBA2P53672 197 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 PSMD4P55036 377 aaKnown RBP13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 FBXW4P57775 412 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 NCALDP61601 193 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 PLAURQ03405 335 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 LIPEQ05469 1076 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 SNTA1Q13424 505 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 CEACAM7Q14002 265 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 EFR3AQ14156 821 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 VMACQ2NL98 169 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 GCNT6Q5T4J0 391 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 CCNJQ5T5M9 372 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 FIGNL1Q6PIW4 674 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 ANGPTL8Q6UXH0 198 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 APOOLQ6UXV4 268 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 RTL4Q6ZR62 310 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 ASRGL1Q7L266 308 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 MDGA2Q7Z553 956 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 PTRH1Q86Y79 214 aaKnown RBP13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 DEFB107AQ8IZN7 70 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 RBMXL3Q8N7X1 1067 aaKnown RBP13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 OR10G3Q8NGC4 313 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 OR4C3Q8NH37 302 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 ASB15Q8WXK1 588 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 EFHD2Q96C19 240 aaPredicted RBP13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 TMEM19Q96HH6 336 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 NODALQ96S42 347 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 ADOQ96SZ5 270 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 UTP23Q9BRU9 249 aaKnown RBP13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 BTBD10Q9BSF8 475 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 ABI3Q9P2A4 366 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 GMPR2Q9P2T1 348 aaKnown RBP13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 SUCOQ9UBS9 1254 aaKnown RBP13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 MRTO4Q9UKD2 239 aaKnown RBP13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 ABCG2Q9UNQ0 655 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 USP22Q9UPT9 525 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 OR10H1Q9Y4A9 318 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 CSAG2Q9Y5P2 127 aa13.59□□□□□ -0.23
SNRPA1-207ENST00000559309 BOD1L1Q8NFC6 3051 aa13.58□□□□□ -0.23
SNRPA1-207ENST00000559309 EML6Q6ZMW3 1958 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 A0A0G2JPF8 293 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 A0A1W2PQD3 144 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 TMEM229AB2RXF0 380 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 HNRNPCL2B2RXH8 293 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 B4DXG7 233 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 HNRNPCL3B7ZW38 293 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 ALG1L2C9J202 215 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 STX11O75558 287 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 UGT2B17O75795 530 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 PGM3O95394 542 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 PRB1P04280 392 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 HNRNPCL4P0DMR1 293 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 ETS2P15036 469 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 HTR1EP28566 365 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 CASP3P42574 277 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 CDK6Q00534 326 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms